Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
UBA3Q8TBC4 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
UBA3Q8TBC4 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
UBA3Q8TBC4 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
UBA3Q8TBC4 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
UBA3Q8TBC4 AP005117.1-201ENST00000584346 1413 ntBASIC18.56■□□□□ 0.56
UBA3Q8TBC4 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.56■□□□□ 0.56
UBA3Q8TBC4 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.55■□□□□ 0.56
UBA3Q8TBC4 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
UBA3Q8TBC4 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
UBA3Q8TBC4 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
UBA3Q8TBC4 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
UBA3Q8TBC4 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBA3Q8TBC4 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
UBA3Q8TBC4 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.55■□□□□ 0.56
UBA3Q8TBC4 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.55■□□□□ 0.56
UBA3Q8TBC4 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
UBA3Q8TBC4 AC106820.2-201ENST00000563775 3264 ntBASIC18.55■□□□□ 0.56
UBA3Q8TBC4 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBA3Q8TBC4 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
UBA3Q8TBC4 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBA3Q8TBC4 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBA3Q8TBC4 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBA3Q8TBC4 EMBP1-201ENST00000458200 901 ntBASIC18.55■□□□□ 0.56
UBA3Q8TBC4 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC18.55■□□□□ 0.56
UBA3Q8TBC4 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.55■□□□□ 0.56
UBA3Q8TBC4 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBA3Q8TBC4 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.55■□□□□ 0.56
UBA3Q8TBC4 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC18.55■□□□□ 0.56
UBA3Q8TBC4 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC18.55■□□□□ 0.56
UBA3Q8TBC4 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
UBA3Q8TBC4 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.55■□□□□ 0.56
UBA3Q8TBC4 AL139327.4-201ENST00000612362 153 ntBASIC18.55■□□□□ 0.56
UBA3Q8TBC4 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBA3Q8TBC4 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBA3Q8TBC4 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBA3Q8TBC4 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBA3Q8TBC4 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.55■□□□□ 0.56
UBA3Q8TBC4 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBA3Q8TBC4 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
UBA3Q8TBC4 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
UBA3Q8TBC4 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
UBA3Q8TBC4 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
UBA3Q8TBC4 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBA3Q8TBC4 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBA3Q8TBC4 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
UBA3Q8TBC4 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
UBA3Q8TBC4 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.54■□□□□ 0.56
UBA3Q8TBC4 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.54■□□□□ 0.56
UBA3Q8TBC4 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.54■□□□□ 0.56
UBA3Q8TBC4 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
UBA3Q8TBC4 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
UBA3Q8TBC4 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
UBA3Q8TBC4 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.54■□□□□ 0.56
UBA3Q8TBC4 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBA3Q8TBC4 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
UBA3Q8TBC4 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBA3Q8TBC4 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.54■□□□□ 0.56
UBA3Q8TBC4 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.54■□□□□ 0.56
UBA3Q8TBC4 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.54■□□□□ 0.56
UBA3Q8TBC4 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBA3Q8TBC4 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.54■□□□□ 0.56
UBA3Q8TBC4 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.54■□□□□ 0.56
UBA3Q8TBC4 AF238378.1-201ENST00000526806 358 ntBASIC18.54■□□□□ 0.56
UBA3Q8TBC4 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.54■□□□□ 0.56
UBA3Q8TBC4 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
UBA3Q8TBC4 STK25P1-201ENST00000585406 838 ntBASIC18.54■□□□□ 0.56
UBA3Q8TBC4 MTDHP3-201ENST00000594186 672 ntBASIC18.54■□□□□ 0.56
UBA3Q8TBC4 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
UBA3Q8TBC4 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
UBA3Q8TBC4 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
UBA3Q8TBC4 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBA3Q8TBC4 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.54■□□□□ 0.56
UBA3Q8TBC4 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBA3Q8TBC4 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBA3Q8TBC4 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBA3Q8TBC4 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBA3Q8TBC4 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBA3Q8TBC4 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
UBA3Q8TBC4 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBA3Q8TBC4 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBA3Q8TBC4 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBA3Q8TBC4 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBA3Q8TBC4 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
UBA3Q8TBC4 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.54■□□□□ 0.56
UBA3Q8TBC4 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
UBA3Q8TBC4 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.54■□□□□ 0.56
UBA3Q8TBC4 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.54■□□□□ 0.56
UBA3Q8TBC4 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBA3Q8TBC4 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.54■□□□□ 0.56
UBA3Q8TBC4 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBA3Q8TBC4 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBA3Q8TBC4 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBA3Q8TBC4 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
UBA3Q8TBC4 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBA3Q8TBC4 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
UBA3Q8TBC4 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
UBA3Q8TBC4 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBA3Q8TBC4 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBA3Q8TBC4 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms