Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 AC021087.4-201ENST00000563761 564 ntBASIC20.69■□□□□ 0.9
NKX2-3Q8TAU0 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NKX2-3Q8TAU0 Z83851.2-201ENST00000609564 659 ntBASIC20.69■□□□□ 0.9
NKX2-3Q8TAU0 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC20.69■□□□□ 0.9
NKX2-3Q8TAU0 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC20.69■□□□□ 0.9
NKX2-3Q8TAU0 AC133963.1-201ENST00000504166 1679 ntBASIC20.69■□□□□ 0.9
NKX2-3Q8TAU0 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
NKX2-3Q8TAU0 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC20.69■□□□□ 0.9
NKX2-3Q8TAU0 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC20.69■□□□□ 0.9
NKX2-3Q8TAU0 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC20.69■□□□□ 0.9
NKX2-3Q8TAU0 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NKX2-3Q8TAU0 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
NKX2-3Q8TAU0 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
NKX2-3Q8TAU0 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NKX2-3Q8TAU0 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC20.69■□□□□ 0.9
NKX2-3Q8TAU0 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
NKX2-3Q8TAU0 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
NKX2-3Q8TAU0 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
NKX2-3Q8TAU0 AC079776.2-201ENST00000641154 1609 ntBASIC20.68■□□□□ 0.9
NKX2-3Q8TAU0 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NKX2-3Q8TAU0 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC20.68■□□□□ 0.9
NKX2-3Q8TAU0 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC20.68■□□□□ 0.9
NKX2-3Q8TAU0 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NKX2-3Q8TAU0 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
NKX2-3Q8TAU0 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC20.68■□□□□ 0.9
NKX2-3Q8TAU0 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC20.68■□□□□ 0.9
NKX2-3Q8TAU0 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NKX2-3Q8TAU0 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC20.68■□□□□ 0.9
NKX2-3Q8TAU0 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NKX2-3Q8TAU0 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NKX2-3Q8TAU0 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NKX2-3Q8TAU0 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NKX2-3Q8TAU0 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NKX2-3Q8TAU0 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NKX2-3Q8TAU0 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NKX2-3Q8TAU0 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
NKX2-3Q8TAU0 AC139713.2-201ENST00000641328 2723 ntBASIC20.68■□□□□ 0.9
NKX2-3Q8TAU0 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
NKX2-3Q8TAU0 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NKX2-3Q8TAU0 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NKX2-3Q8TAU0 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NKX2-3Q8TAU0 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NKX2-3Q8TAU0 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC20.67■□□□□ 0.9
NKX2-3Q8TAU0 SPDYE21P-201ENST00000413323 827 ntBASIC20.67■□□□□ 0.9
NKX2-3Q8TAU0 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC20.67■□□□□ 0.9
NKX2-3Q8TAU0 AC004832.2-201ENST00000426397 482 ntBASIC20.67■□□□□ 0.9
NKX2-3Q8TAU0 DNAJB3-202ENST00000449667 1266 ntBASIC20.67■□□□□ 0.9
NKX2-3Q8TAU0 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC20.67■□□□□ 0.9
NKX2-3Q8TAU0 AC025062.2-201ENST00000605477 670 ntBASIC20.67■□□□□ 0.9
NKX2-3Q8TAU0 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NKX2-3Q8TAU0 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NKX2-3Q8TAU0 AC073592.4-201ENST00000623827 446 ntBASIC20.67■□□□□ 0.9
NKX2-3Q8TAU0 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
NKX2-3Q8TAU0 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NKX2-3Q8TAU0 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NKX2-3Q8TAU0 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NKX2-3Q8TAU0 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NKX2-3Q8TAU0 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC20.67■□□□□ 0.9
NKX2-3Q8TAU0 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
NKX2-3Q8TAU0 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NKX2-3Q8TAU0 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
NKX2-3Q8TAU0 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NKX2-3Q8TAU0 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC20.66■□□□□ 0.9
NKX2-3Q8TAU0 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NKX2-3Q8TAU0 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NKX2-3Q8TAU0 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
NKX2-3Q8TAU0 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NKX2-3Q8TAU0 AC103564.2-201ENST00000432853 1299 ntBASIC20.66■□□□□ 0.9
NKX2-3Q8TAU0 RNA5SP416-201ENST00000516838 111 ntBASIC20.66■□□□□ 0.9
NKX2-3Q8TAU0 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC20.66■□□□□ 0.9
NKX2-3Q8TAU0 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC20.66■□□□□ 0.9
NKX2-3Q8TAU0 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC20.66■□□□□ 0.9
NKX2-3Q8TAU0 TK1-204ENST00000590430 683 ntTSL 3 BASIC20.66■□□□□ 0.9
NKX2-3Q8TAU0 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NKX2-3Q8TAU0 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC20.66■□□□□ 0.9
NKX2-3Q8TAU0 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC20.66■□□□□ 0.9
NKX2-3Q8TAU0 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
NKX2-3Q8TAU0 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC20.66■□□□□ 0.9
NKX2-3Q8TAU0 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
NKX2-3Q8TAU0 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.65■□□□□ 0.9
NKX2-3Q8TAU0 AR-207ENST00000612010 3896 ntTSL 5 BASIC20.65■□□□□ 0.9
NKX2-3Q8TAU0 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NKX2-3Q8TAU0 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NKX2-3Q8TAU0 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC20.65■□□□□ 0.9
NKX2-3Q8TAU0 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NKX2-3Q8TAU0 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC20.65■□□□□ 0.9
NKX2-3Q8TAU0 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NKX2-3Q8TAU0 KRT18P28-201ENST00000453838 1332 ntBASIC20.65■□□□□ 0.9
NKX2-3Q8TAU0 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NKX2-3Q8TAU0 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NKX2-3Q8TAU0 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NKX2-3Q8TAU0 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
NKX2-3Q8TAU0 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC20.65■□□□□ 0.9
NKX2-3Q8TAU0 AC244107.1-201ENST00000442033 332 ntBASIC20.65■□□□□ 0.9
NKX2-3Q8TAU0 AC002558.1-201ENST00000488906 803 ntBASIC20.65■□□□□ 0.9
NKX2-3Q8TAU0 AC002347.1-201ENST00000569543 541 ntBASIC20.65■□□□□ 0.9
NKX2-3Q8TAU0 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
NKX2-3Q8TAU0 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC20.65■□□□□ 0.9
NKX2-3Q8TAU0 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC20.65■□□□□ 0.9
NKX2-3Q8TAU0 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms