Protein–RNA interactions for Protein: Q8N9R6

CDRT4, CMT1A duplicated region transcript 4 protein, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT4Q8N9R6 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDRT4Q8N9R6 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDRT4Q8N9R6 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDRT4Q8N9R6 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDRT4Q8N9R6 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.29■□□□□ 0.2
CDRT4Q8N9R6 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDRT4Q8N9R6 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.29■□□□□ 0.2
CDRT4Q8N9R6 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDRT4Q8N9R6 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDRT4Q8N9R6 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.29■□□□□ 0.2
CDRT4Q8N9R6 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.29■□□□□ 0.2
CDRT4Q8N9R6 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDRT4Q8N9R6 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CDRT4Q8N9R6 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CDRT4Q8N9R6 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDRT4Q8N9R6 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDRT4Q8N9R6 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDRT4Q8N9R6 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CDRT4Q8N9R6 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CDRT4Q8N9R6 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CDRT4Q8N9R6 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.29■□□□□ 0.2
CDRT4Q8N9R6 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.29■□□□□ 0.2
CDRT4Q8N9R6 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDRT4Q8N9R6 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDRT4Q8N9R6 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDRT4Q8N9R6 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.29■□□□□ 0.2
CDRT4Q8N9R6 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDRT4Q8N9R6 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDRT4Q8N9R6 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDRT4Q8N9R6 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.29■□□□□ 0.2
CDRT4Q8N9R6 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDRT4Q8N9R6 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDRT4Q8N9R6 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDRT4Q8N9R6 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CDRT4Q8N9R6 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.29■□□□□ 0.2
CDRT4Q8N9R6 AL353593.2-201ENST00000602529 1483 ntBASIC16.29■□□□□ 0.2
CDRT4Q8N9R6 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDRT4Q8N9R6 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
CDRT4Q8N9R6 KRT8P10-201ENST00000450021 1447 ntBASIC16.28■□□□□ 0.2
CDRT4Q8N9R6 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDRT4Q8N9R6 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDRT4Q8N9R6 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.28■□□□□ 0.2
CDRT4Q8N9R6 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDRT4Q8N9R6 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.28■□□□□ 0.2
CDRT4Q8N9R6 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDRT4Q8N9R6 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.28■□□□□ 0.2
CDRT4Q8N9R6 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.28■□□□□ 0.2
CDRT4Q8N9R6 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDRT4Q8N9R6 INTS4P1-201ENST00000438455 1935 ntBASIC16.28■□□□□ 0.2
CDRT4Q8N9R6 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDRT4Q8N9R6 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDRT4Q8N9R6 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDRT4Q8N9R6 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
CDRT4Q8N9R6 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDRT4Q8N9R6 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.28■□□□□ 0.2
CDRT4Q8N9R6 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.28■□□□□ 0.2
CDRT4Q8N9R6 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.28■□□□□ 0.2
CDRT4Q8N9R6 STK25P1-201ENST00000585406 838 ntBASIC16.28■□□□□ 0.2
CDRT4Q8N9R6 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.28■□□□□ 0.2
CDRT4Q8N9R6 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CDRT4Q8N9R6 AC093458.2-201ENST00000623150 629 ntBASIC16.28■□□□□ 0.2
CDRT4Q8N9R6 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CDRT4Q8N9R6 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDRT4Q8N9R6 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDRT4Q8N9R6 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDRT4Q8N9R6 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDRT4Q8N9R6 AC020916.1-201ENST00000587762 1774 ntBASIC16.28■□□□□ 0.2
CDRT4Q8N9R6 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDRT4Q8N9R6 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDRT4Q8N9R6 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CDRT4Q8N9R6 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.28■□□□□ 0.2
CDRT4Q8N9R6 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.28■□□□□ 0.2
CDRT4Q8N9R6 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.28■□□□□ 0.2
CDRT4Q8N9R6 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDRT4Q8N9R6 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CDRT4Q8N9R6 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CDRT4Q8N9R6 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CDRT4Q8N9R6 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDRT4Q8N9R6 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CDRT4Q8N9R6 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDRT4Q8N9R6 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDRT4Q8N9R6 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.27■□□□□ 0.2
CDRT4Q8N9R6 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.27■□□□□ 0.2
CDRT4Q8N9R6 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDRT4Q8N9R6 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.27■□□□□ 0.2
CDRT4Q8N9R6 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CDRT4Q8N9R6 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.27■□□□□ 0.2
CDRT4Q8N9R6 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CDRT4Q8N9R6 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
CDRT4Q8N9R6 AC114341.1-201ENST00000618070 349 ntBASIC16.27■□□□□ 0.2
CDRT4Q8N9R6 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CDRT4Q8N9R6 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CDRT4Q8N9R6 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CDRT4Q8N9R6 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDRT4Q8N9R6 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CDRT4Q8N9R6 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
CDRT4Q8N9R6 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDRT4Q8N9R6 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDRT4Q8N9R6 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDRT4Q8N9R6 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.27■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms