Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.94■□□□□ 0.3
KRT78Q8N1N4 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
KRT78Q8N1N4 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.94■□□□□ 0.3
KRT78Q8N1N4 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.94■□□□□ 0.3
KRT78Q8N1N4 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
KRT78Q8N1N4 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
KRT78Q8N1N4 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KRT78Q8N1N4 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
KRT78Q8N1N4 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
KRT78Q8N1N4 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
KRT78Q8N1N4 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
KRT78Q8N1N4 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
KRT78Q8N1N4 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
KRT78Q8N1N4 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
KRT78Q8N1N4 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
KRT78Q8N1N4 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.94■□□□□ 0.3
KRT78Q8N1N4 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
KRT78Q8N1N4 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KRT78Q8N1N4 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KRT78Q8N1N4 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.94■□□□□ 0.3
KRT78Q8N1N4 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
KRT78Q8N1N4 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
KRT78Q8N1N4 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
KRT78Q8N1N4 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
KRT78Q8N1N4 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.93■□□□□ 0.3
KRT78Q8N1N4 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
KRT78Q8N1N4 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
KRT78Q8N1N4 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
KRT78Q8N1N4 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
KRT78Q8N1N4 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
KRT78Q8N1N4 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
KRT78Q8N1N4 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.93■□□□□ 0.3
KRT78Q8N1N4 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
KRT78Q8N1N4 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
KRT78Q8N1N4 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.93■□□□□ 0.3
KRT78Q8N1N4 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.93■□□□□ 0.3
KRT78Q8N1N4 AP000867.3-201ENST00000524675 377 ntBASIC16.93■□□□□ 0.3
KRT78Q8N1N4 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.93■□□□□ 0.3
KRT78Q8N1N4 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.93■□□□□ 0.3
KRT78Q8N1N4 AC074051.2-201ENST00000565115 352 ntBASIC16.93■□□□□ 0.3
KRT78Q8N1N4 AC111152.3-201ENST00000569699 673 ntBASIC16.93■□□□□ 0.3
KRT78Q8N1N4 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.93■□□□□ 0.3
KRT78Q8N1N4 MIR3180-1-201ENST00000580374 94 ntBASIC16.93■□□□□ 0.3
KRT78Q8N1N4 MIR3180-3-201ENST00000584616 94 ntBASIC16.93■□□□□ 0.3
KRT78Q8N1N4 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
KRT78Q8N1N4 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
KRT78Q8N1N4 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.93■□□□□ 0.3
KRT78Q8N1N4 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC16.93■□□□□ 0.3
KRT78Q8N1N4 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
KRT78Q8N1N4 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.93■□□□□ 0.3
KRT78Q8N1N4 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
KRT78Q8N1N4 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
KRT78Q8N1N4 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
KRT78Q8N1N4 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
KRT78Q8N1N4 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.93■□□□□ 0.3
KRT78Q8N1N4 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
KRT78Q8N1N4 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
KRT78Q8N1N4 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
KRT78Q8N1N4 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
KRT78Q8N1N4 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
KRT78Q8N1N4 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.93■□□□□ 0.3
KRT78Q8N1N4 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
KRT78Q8N1N4 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
KRT78Q8N1N4 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
KRT78Q8N1N4 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.92■□□□□ 0.3
KRT78Q8N1N4 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
KRT78Q8N1N4 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.92■□□□□ 0.3
KRT78Q8N1N4 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
KRT78Q8N1N4 NSUN5P1-202ENST00000421140 1535 ntBASIC16.92■□□□□ 0.3
KRT78Q8N1N4 NSUN5P2-203ENST00000457352 1529 ntBASIC16.92■□□□□ 0.3
KRT78Q8N1N4 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
KRT78Q8N1N4 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
KRT78Q8N1N4 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.92■□□□□ 0.3
KRT78Q8N1N4 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
KRT78Q8N1N4 UPK3BP1-201ENST00000428678 509 ntBASIC16.92■□□□□ 0.3
KRT78Q8N1N4 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.92■□□□□ 0.3
KRT78Q8N1N4 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.92■□□□□ 0.3
KRT78Q8N1N4 AC012615.1-201ENST00000565797 1299 ntBASIC16.92■□□□□ 0.3
KRT78Q8N1N4 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.92■□□□□ 0.3
KRT78Q8N1N4 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
KRT78Q8N1N4 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.92■□□□□ 0.3
KRT78Q8N1N4 AC011467.2-201ENST00000598425 242 ntBASIC16.92■□□□□ 0.3
KRT78Q8N1N4 AC092119.3-201ENST00000612618 583 ntBASIC16.92■□□□□ 0.3
KRT78Q8N1N4 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
KRT78Q8N1N4 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
KRT78Q8N1N4 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
KRT78Q8N1N4 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
KRT78Q8N1N4 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
KRT78Q8N1N4 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
KRT78Q8N1N4 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
KRT78Q8N1N4 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.92■□□□□ 0.3
KRT78Q8N1N4 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
KRT78Q8N1N4 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
KRT78Q8N1N4 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.92■□□□□ 0.3
KRT78Q8N1N4 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
KRT78Q8N1N4 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
KRT78Q8N1N4 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.92■□□□□ 0.3
KRT78Q8N1N4 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
KRT78Q8N1N4 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KRT78Q8N1N4 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms