Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 Z69720.1-201ENST00000601483 472 ntBASIC16.55■□□□□ 0.24
CCDC116Q8IYX3 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.55■□□□□ 0.24
CCDC116Q8IYX3 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
CCDC116Q8IYX3 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.55■□□□□ 0.24
CCDC116Q8IYX3 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC116Q8IYX3 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC116Q8IYX3 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.55■□□□□ 0.24
CCDC116Q8IYX3 LYSMD4-203ENST00000378904 2122 ntBASIC16.55■□□□□ 0.24
CCDC116Q8IYX3 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.55■□□□□ 0.24
CCDC116Q8IYX3 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CCDC116Q8IYX3 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
CCDC116Q8IYX3 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
CCDC116Q8IYX3 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CCDC116Q8IYX3 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CCDC116Q8IYX3 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.55■□□□□ 0.24
CCDC116Q8IYX3 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.55■□□□□ 0.24
CCDC116Q8IYX3 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC116Q8IYX3 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC116Q8IYX3 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC116Q8IYX3 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC116Q8IYX3 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC116Q8IYX3 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.54■□□□□ 0.24
CCDC116Q8IYX3 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC116Q8IYX3 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC116Q8IYX3 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.54■□□□□ 0.24
CCDC116Q8IYX3 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC116Q8IYX3 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.54■□□□□ 0.24
CCDC116Q8IYX3 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.54■□□□□ 0.24
CCDC116Q8IYX3 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
CCDC116Q8IYX3 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.54■□□□□ 0.24
CCDC116Q8IYX3 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC116Q8IYX3 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.54■□□□□ 0.24
CCDC116Q8IYX3 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.54■□□□□ 0.24
CCDC116Q8IYX3 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC116Q8IYX3 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC116Q8IYX3 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.54■□□□□ 0.24
CCDC116Q8IYX3 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC116Q8IYX3 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC116Q8IYX3 KRT17P6-201ENST00000453795 1220 ntBASIC16.54■□□□□ 0.24
CCDC116Q8IYX3 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.54■□□□□ 0.24
CCDC116Q8IYX3 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.54■□□□□ 0.24
CCDC116Q8IYX3 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.54■□□□□ 0.24
CCDC116Q8IYX3 NPAP1P7-201ENST00000613027 823 ntBASIC16.54■□□□□ 0.24
CCDC116Q8IYX3 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.54■□□□□ 0.24
CCDC116Q8IYX3 AC093458.2-201ENST00000623150 629 ntBASIC16.54■□□□□ 0.24
CCDC116Q8IYX3 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.54■□□□□ 0.24
CCDC116Q8IYX3 AL023806.1-201ENST00000603994 1649 ntBASIC16.54■□□□□ 0.24
CCDC116Q8IYX3 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC116Q8IYX3 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.54■□□□□ 0.24
CCDC116Q8IYX3 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC116Q8IYX3 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC116Q8IYX3 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC116Q8IYX3 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC116Q8IYX3 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC116Q8IYX3 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC116Q8IYX3 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.54■□□□□ 0.24
CCDC116Q8IYX3 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC116Q8IYX3 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC116Q8IYX3 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC116Q8IYX3 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC116Q8IYX3 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC116Q8IYX3 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC116Q8IYX3 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC116Q8IYX3 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC116Q8IYX3 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
CCDC116Q8IYX3 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.53■□□□□ 0.24
CCDC116Q8IYX3 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.53■□□□□ 0.24
CCDC116Q8IYX3 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC116Q8IYX3 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.53■□□□□ 0.24
CCDC116Q8IYX3 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC116Q8IYX3 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC116Q8IYX3 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
CCDC116Q8IYX3 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC116Q8IYX3 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CCDC116Q8IYX3 FAM220CP-201ENST00000395253 831 ntBASIC16.53■□□□□ 0.24
CCDC116Q8IYX3 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.53■□□□□ 0.24
CCDC116Q8IYX3 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CCDC116Q8IYX3 MINOS1P3-201ENST00000457048 203 ntBASIC16.53■□□□□ 0.24
CCDC116Q8IYX3 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.53■□□□□ 0.24
CCDC116Q8IYX3 AP000867.3-201ENST00000524675 377 ntBASIC16.53■□□□□ 0.24
CCDC116Q8IYX3 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.53■□□□□ 0.24
CCDC116Q8IYX3 AC109462.3-201ENST00000573934 613 ntBASIC16.53■□□□□ 0.24
CCDC116Q8IYX3 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.53■□□□□ 0.24
CCDC116Q8IYX3 AC092119.3-201ENST00000612618 583 ntBASIC16.53■□□□□ 0.24
CCDC116Q8IYX3 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.53■□□□□ 0.24
CCDC116Q8IYX3 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.53■□□□□ 0.24
CCDC116Q8IYX3 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CCDC116Q8IYX3 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC116Q8IYX3 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC116Q8IYX3 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.53■□□□□ 0.24
CCDC116Q8IYX3 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC116Q8IYX3 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC116Q8IYX3 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.53■□□□□ 0.24
CCDC116Q8IYX3 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.53■□□□□ 0.24
CCDC116Q8IYX3 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC116Q8IYX3 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC116Q8IYX3 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC116Q8IYX3 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC116Q8IYX3 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.52■□□□□ 0.24
CCDC116Q8IYX3 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms