Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
COL23A1Q86Y22 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
COL23A1Q86Y22 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
COL23A1Q86Y22 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
COL23A1Q86Y22 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC21.79■■□□□ 1.08
COL23A1Q86Y22 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
COL23A1Q86Y22 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC21.78■■□□□ 1.08
COL23A1Q86Y22 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC21.78■■□□□ 1.08
COL23A1Q86Y22 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
COL23A1Q86Y22 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC21.78■■□□□ 1.08
COL23A1Q86Y22 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
COL23A1Q86Y22 ARSEP1-201ENST00000420443 635 ntBASIC21.78■■□□□ 1.08
COL23A1Q86Y22 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
COL23A1Q86Y22 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC21.78■■□□□ 1.08
COL23A1Q86Y22 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC21.78■■□□□ 1.08
COL23A1Q86Y22 KRT8P23-201ENST00000560090 1207 ntBASIC21.78■■□□□ 1.08
COL23A1Q86Y22 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
COL23A1Q86Y22 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC21.78■■□□□ 1.08
COL23A1Q86Y22 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
COL23A1Q86Y22 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
COL23A1Q86Y22 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
COL23A1Q86Y22 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
COL23A1Q86Y22 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
COL23A1Q86Y22 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
COL23A1Q86Y22 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
COL23A1Q86Y22 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC21.78■■□□□ 1.08
COL23A1Q86Y22 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
COL23A1Q86Y22 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
COL23A1Q86Y22 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
COL23A1Q86Y22 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
COL23A1Q86Y22 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
COL23A1Q86Y22 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
COL23A1Q86Y22 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
COL23A1Q86Y22 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
COL23A1Q86Y22 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
COL23A1Q86Y22 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
COL23A1Q86Y22 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC21.77■■□□□ 1.08
COL23A1Q86Y22 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
COL23A1Q86Y22 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC21.77■■□□□ 1.08
COL23A1Q86Y22 ATP5G2P4-201ENST00000442175 420 ntBASIC21.77■■□□□ 1.08
COL23A1Q86Y22 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC21.77■■□□□ 1.08
COL23A1Q86Y22 MMP17-203ENST00000535004 719 ntTSL 3 BASIC21.77■■□□□ 1.08
COL23A1Q86Y22 MIR6080-201ENST00000617359 66 ntBASIC21.77■■□□□ 1.08
COL23A1Q86Y22 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
COL23A1Q86Y22 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
COL23A1Q86Y22 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC21.77■■□□□ 1.08
COL23A1Q86Y22 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
COL23A1Q86Y22 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
COL23A1Q86Y22 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC21.77■■□□□ 1.07
COL23A1Q86Y22 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
COL23A1Q86Y22 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC21.77■■□□□ 1.07
COL23A1Q86Y22 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
COL23A1Q86Y22 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
COL23A1Q86Y22 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.76■■□□□ 1.07
COL23A1Q86Y22 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
COL23A1Q86Y22 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC21.76■■□□□ 1.07
COL23A1Q86Y22 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
COL23A1Q86Y22 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
COL23A1Q86Y22 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
COL23A1Q86Y22 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
COL23A1Q86Y22 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
COL23A1Q86Y22 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
COL23A1Q86Y22 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
COL23A1Q86Y22 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
COL23A1Q86Y22 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
COL23A1Q86Y22 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
COL23A1Q86Y22 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC21.76■■□□□ 1.07
COL23A1Q86Y22 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
COL23A1Q86Y22 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC21.76■■□□□ 1.07
COL23A1Q86Y22 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
COL23A1Q86Y22 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC21.76■■□□□ 1.07
COL23A1Q86Y22 MIR4515-201ENST00000584082 81 ntBASIC21.76■■□□□ 1.07
COL23A1Q86Y22 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
COL23A1Q86Y22 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
COL23A1Q86Y22 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC21.76■■□□□ 1.07
COL23A1Q86Y22 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
COL23A1Q86Y22 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
COL23A1Q86Y22 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC21.76■■□□□ 1.07
COL23A1Q86Y22 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
COL23A1Q86Y22 AL135999.2-201ENST00000622438 1686 ntBASIC21.75■■□□□ 1.07
COL23A1Q86Y22 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC21.75■■□□□ 1.07
COL23A1Q86Y22 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
COL23A1Q86Y22 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
COL23A1Q86Y22 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
COL23A1Q86Y22 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC21.75■■□□□ 1.07
COL23A1Q86Y22 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
COL23A1Q86Y22 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
COL23A1Q86Y22 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
COL23A1Q86Y22 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
COL23A1Q86Y22 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
COL23A1Q86Y22 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC21.75■■□□□ 1.07
COL23A1Q86Y22 HMGA1P7-201ENST00000406908 502 ntBASIC21.75■■□□□ 1.07
COL23A1Q86Y22 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC21.75■■□□□ 1.07
COL23A1Q86Y22 AC241585.1-201ENST00000433527 519 ntBASIC21.75■■□□□ 1.07
COL23A1Q86Y22 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC21.75■■□□□ 1.07
COL23A1Q86Y22 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
COL23A1Q86Y22 AL161645.1-201ENST00000622716 1255 ntBASIC21.75■■□□□ 1.07
COL23A1Q86Y22 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
COL23A1Q86Y22 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
COL23A1Q86Y22 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms