Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.33■□□□□ 0.52
FOXR1Q6PIV2 AC069148.1-201ENST00000608741 768 ntBASIC18.33■□□□□ 0.52
FOXR1Q6PIV2 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
FOXR1Q6PIV2 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
FOXR1Q6PIV2 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC18.33■□□□□ 0.52
FOXR1Q6PIV2 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
FOXR1Q6PIV2 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
FOXR1Q6PIV2 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
FOXR1Q6PIV2 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
FOXR1Q6PIV2 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
FOXR1Q6PIV2 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
FOXR1Q6PIV2 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.33■□□□□ 0.52
FOXR1Q6PIV2 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC18.33■□□□□ 0.52
FOXR1Q6PIV2 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.33■□□□□ 0.52
FOXR1Q6PIV2 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
FOXR1Q6PIV2 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC18.32■□□□□ 0.52
FOXR1Q6PIV2 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
FOXR1Q6PIV2 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
FOXR1Q6PIV2 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
FOXR1Q6PIV2 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC18.32■□□□□ 0.52
FOXR1Q6PIV2 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
FOXR1Q6PIV2 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
FOXR1Q6PIV2 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.32■□□□□ 0.52
FOXR1Q6PIV2 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
FOXR1Q6PIV2 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
FOXR1Q6PIV2 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.32■□□□□ 0.52
FOXR1Q6PIV2 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
FOXR1Q6PIV2 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
FOXR1Q6PIV2 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.32■□□□□ 0.52
FOXR1Q6PIV2 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.32■□□□□ 0.52
FOXR1Q6PIV2 PRSS44-201ENST00000515154 1146 ntBASIC18.32■□□□□ 0.52
FOXR1Q6PIV2 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
FOXR1Q6PIV2 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.32■□□□□ 0.52
FOXR1Q6PIV2 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.32■□□□□ 0.52
FOXR1Q6PIV2 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
FOXR1Q6PIV2 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
FOXR1Q6PIV2 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
FOXR1Q6PIV2 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
FOXR1Q6PIV2 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
FOXR1Q6PIV2 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
FOXR1Q6PIV2 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
FOXR1Q6PIV2 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC18.32■□□□□ 0.52
FOXR1Q6PIV2 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC18.32■□□□□ 0.52
FOXR1Q6PIV2 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
FOXR1Q6PIV2 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
FOXR1Q6PIV2 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
FOXR1Q6PIV2 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
FOXR1Q6PIV2 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
FOXR1Q6PIV2 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
FOXR1Q6PIV2 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
FOXR1Q6PIV2 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
FOXR1Q6PIV2 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
FOXR1Q6PIV2 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.31■□□□□ 0.52
FOXR1Q6PIV2 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
FOXR1Q6PIV2 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
FOXR1Q6PIV2 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
FOXR1Q6PIV2 AL450487.1-201ENST00000426799 995 ntBASIC18.31■□□□□ 0.52
FOXR1Q6PIV2 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.31■□□□□ 0.52
FOXR1Q6PIV2 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.31■□□□□ 0.52
FOXR1Q6PIV2 DUSP5P1-201ENST00000441325 1139 ntBASIC18.31■□□□□ 0.52
FOXR1Q6PIV2 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
FOXR1Q6PIV2 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.31■□□□□ 0.52
FOXR1Q6PIV2 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.31■□□□□ 0.52
FOXR1Q6PIV2 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
FOXR1Q6PIV2 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
FOXR1Q6PIV2 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.31■□□□□ 0.52
FOXR1Q6PIV2 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.31■□□□□ 0.52
FOXR1Q6PIV2 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
FOXR1Q6PIV2 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
FOXR1Q6PIV2 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
FOXR1Q6PIV2 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
FOXR1Q6PIV2 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
FOXR1Q6PIV2 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.31■□□□□ 0.52
FOXR1Q6PIV2 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
FOXR1Q6PIV2 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
FOXR1Q6PIV2 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
FOXR1Q6PIV2 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.31■□□□□ 0.52
FOXR1Q6PIV2 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
FOXR1Q6PIV2 OS9-205ENST00000413095 1660 ntTSL 2 BASIC18.31■□□□□ 0.52
FOXR1Q6PIV2 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
FOXR1Q6PIV2 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC18.31■□□□□ 0.52
FOXR1Q6PIV2 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
FOXR1Q6PIV2 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
FOXR1Q6PIV2 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC18.3■□□□□ 0.52
FOXR1Q6PIV2 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.3■□□□□ 0.52
FOXR1Q6PIV2 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
FOXR1Q6PIV2 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
FOXR1Q6PIV2 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.3■□□□□ 0.52
FOXR1Q6PIV2 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.3■□□□□ 0.52
FOXR1Q6PIV2 AL603756.1-201ENST00000606511 2163 ntBASIC18.3■□□□□ 0.52
FOXR1Q6PIV2 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
FOXR1Q6PIV2 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
FOXR1Q6PIV2 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
FOXR1Q6PIV2 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
FOXR1Q6PIV2 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
FOXR1Q6PIV2 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.3■□□□□ 0.52
FOXR1Q6PIV2 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.3■□□□□ 0.52
FOXR1Q6PIV2 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
FOXR1Q6PIV2 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.3■□□□□ 0.52
FOXR1Q6PIV2 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms