Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TTC39BQ5VTQ0 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.27■□□□□ 0.52
TTC39BQ5VTQ0 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TTC39BQ5VTQ0 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TTC39BQ5VTQ0 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.27■□□□□ 0.52
TTC39BQ5VTQ0 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TTC39BQ5VTQ0 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
TTC39BQ5VTQ0 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TTC39BQ5VTQ0 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TTC39BQ5VTQ0 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TTC39BQ5VTQ0 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.27■□□□□ 0.52
TTC39BQ5VTQ0 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TTC39BQ5VTQ0 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TTC39BQ5VTQ0 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TTC39BQ5VTQ0 COX5BP2-201ENST00000392354 334 ntBASIC18.27■□□□□ 0.52
TTC39BQ5VTQ0 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.27■□□□□ 0.52
TTC39BQ5VTQ0 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TTC39BQ5VTQ0 SAPCD2P3-201ENST00000455031 850 ntBASIC18.27■□□□□ 0.52
TTC39BQ5VTQ0 UNC93B7-201ENST00000509439 705 ntBASIC18.27■□□□□ 0.52
TTC39BQ5VTQ0 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
TTC39BQ5VTQ0 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TTC39BQ5VTQ0 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TTC39BQ5VTQ0 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC18.27■□□□□ 0.52
TTC39BQ5VTQ0 REXO1L6P-202ENST00000619970 1078 ntBASIC18.27■□□□□ 0.52
TTC39BQ5VTQ0 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TTC39BQ5VTQ0 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TTC39BQ5VTQ0 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TTC39BQ5VTQ0 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TTC39BQ5VTQ0 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.27■□□□□ 0.52
TTC39BQ5VTQ0 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
TTC39BQ5VTQ0 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.51
TTC39BQ5VTQ0 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TTC39BQ5VTQ0 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
TTC39BQ5VTQ0 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.27■□□□□ 0.51
TTC39BQ5VTQ0 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
TTC39BQ5VTQ0 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TTC39BQ5VTQ0 AC108860.2-201ENST00000562760 2183 ntBASIC18.27■□□□□ 0.51
TTC39BQ5VTQ0 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
TTC39BQ5VTQ0 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
TTC39BQ5VTQ0 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TTC39BQ5VTQ0 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TTC39BQ5VTQ0 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TTC39BQ5VTQ0 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.26■□□□□ 0.51
TTC39BQ5VTQ0 AC010460.3-201ENST00000511359 1579 ntBASIC18.26■□□□□ 0.51
TTC39BQ5VTQ0 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
TTC39BQ5VTQ0 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.26■□□□□ 0.51
TTC39BQ5VTQ0 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TTC39BQ5VTQ0 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.26■□□□□ 0.51
TTC39BQ5VTQ0 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TTC39BQ5VTQ0 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
TTC39BQ5VTQ0 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TTC39BQ5VTQ0 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TTC39BQ5VTQ0 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TTC39BQ5VTQ0 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TTC39BQ5VTQ0 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TTC39BQ5VTQ0 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.26■□□□□ 0.51
TTC39BQ5VTQ0 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
TTC39BQ5VTQ0 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TTC39BQ5VTQ0 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
TTC39BQ5VTQ0 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.26■□□□□ 0.51
TTC39BQ5VTQ0 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TTC39BQ5VTQ0 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.26■□□□□ 0.51
TTC39BQ5VTQ0 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.26■□□□□ 0.51
TTC39BQ5VTQ0 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC18.26■□□□□ 0.51
TTC39BQ5VTQ0 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC18.26■□□□□ 0.51
TTC39BQ5VTQ0 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.26■□□□□ 0.51
TTC39BQ5VTQ0 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.26■□□□□ 0.51
TTC39BQ5VTQ0 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.26■□□□□ 0.51
TTC39BQ5VTQ0 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.26■□□□□ 0.51
TTC39BQ5VTQ0 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TTC39BQ5VTQ0 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
TTC39BQ5VTQ0 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TTC39BQ5VTQ0 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.26■□□□□ 0.51
TTC39BQ5VTQ0 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
TTC39BQ5VTQ0 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.26■□□□□ 0.51
TTC39BQ5VTQ0 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.26■□□□□ 0.51
TTC39BQ5VTQ0 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
TTC39BQ5VTQ0 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.26■□□□□ 0.51
TTC39BQ5VTQ0 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TTC39BQ5VTQ0 AC100803.2-201ENST00000562459 1963 ntBASIC18.26■□□□□ 0.51
TTC39BQ5VTQ0 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TTC39BQ5VTQ0 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TTC39BQ5VTQ0 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TTC39BQ5VTQ0 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TTC39BQ5VTQ0 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TTC39BQ5VTQ0 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TTC39BQ5VTQ0 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TTC39BQ5VTQ0 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TTC39BQ5VTQ0 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
TTC39BQ5VTQ0 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TTC39BQ5VTQ0 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.25■□□□□ 0.51
TTC39BQ5VTQ0 BX276092.7-203ENST00000637198 1536 ntBASIC18.25■□□□□ 0.51
TTC39BQ5VTQ0 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
TTC39BQ5VTQ0 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.25■□□□□ 0.51
TTC39BQ5VTQ0 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TTC39BQ5VTQ0 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TTC39BQ5VTQ0 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TTC39BQ5VTQ0 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TTC39BQ5VTQ0 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC18.25■□□□□ 0.51
TTC39BQ5VTQ0 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms