Protein–RNA interactions for Protein: Q5SW96

LDLRAP1, Low density lipoprotein receptor adapter protein 1, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1Q5SW96 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LDLRAP1Q5SW96 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LDLRAP1Q5SW96 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
LDLRAP1Q5SW96 PRORSD1P-202ENST00000563365 2154 ntBASIC17.47■□□□□ 0.39
LDLRAP1Q5SW96 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.47■□□□□ 0.39
LDLRAP1Q5SW96 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.47■□□□□ 0.39
LDLRAP1Q5SW96 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
LDLRAP1Q5SW96 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LDLRAP1Q5SW96 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
LDLRAP1Q5SW96 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.47■□□□□ 0.39
LDLRAP1Q5SW96 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
LDLRAP1Q5SW96 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
LDLRAP1Q5SW96 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LDLRAP1Q5SW96 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
LDLRAP1Q5SW96 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LDLRAP1Q5SW96 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LDLRAP1Q5SW96 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
LDLRAP1Q5SW96 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LDLRAP1Q5SW96 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LDLRAP1Q5SW96 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.46■□□□□ 0.39
LDLRAP1Q5SW96 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LDLRAP1Q5SW96 AC005104.2-201ENST00000427818 678 ntBASIC17.46■□□□□ 0.39
LDLRAP1Q5SW96 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.46■□□□□ 0.39
LDLRAP1Q5SW96 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.46■□□□□ 0.39
LDLRAP1Q5SW96 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.46■□□□□ 0.39
LDLRAP1Q5SW96 AC111152.3-201ENST00000569699 673 ntBASIC17.46■□□□□ 0.39
LDLRAP1Q5SW96 AL732292.2-201ENST00000609649 430 ntBASIC17.46■□□□□ 0.39
LDLRAP1Q5SW96 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LDLRAP1Q5SW96 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LDLRAP1Q5SW96 AC008894.3-201ENST00000624324 3103 ntBASIC17.46■□□□□ 0.39
LDLRAP1Q5SW96 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LDLRAP1Q5SW96 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
LDLRAP1Q5SW96 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.46■□□□□ 0.39
LDLRAP1Q5SW96 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
LDLRAP1Q5SW96 OR6D1P-202ENST00000641007 5290 ntBASIC17.46■□□□□ 0.38
LDLRAP1Q5SW96 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.46■□□□□ 0.38
LDLRAP1Q5SW96 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.46■□□□□ 0.38
LDLRAP1Q5SW96 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
LDLRAP1Q5SW96 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
LDLRAP1Q5SW96 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
LDLRAP1Q5SW96 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LDLRAP1Q5SW96 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
LDLRAP1Q5SW96 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
LDLRAP1Q5SW96 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.45■□□□□ 0.38
LDLRAP1Q5SW96 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
LDLRAP1Q5SW96 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LDLRAP1Q5SW96 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
LDLRAP1Q5SW96 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
LDLRAP1Q5SW96 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LDLRAP1Q5SW96 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.45■□□□□ 0.38
LDLRAP1Q5SW96 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
LDLRAP1Q5SW96 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.45■□□□□ 0.38
LDLRAP1Q5SW96 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.45■□□□□ 0.38
LDLRAP1Q5SW96 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.45■□□□□ 0.38
LDLRAP1Q5SW96 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.45■□□□□ 0.38
LDLRAP1Q5SW96 IGHV3-52-201ENST00000519770 353 ntBASIC17.45■□□□□ 0.38
LDLRAP1Q5SW96 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.45■□□□□ 0.38
LDLRAP1Q5SW96 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
LDLRAP1Q5SW96 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LDLRAP1Q5SW96 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LDLRAP1Q5SW96 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.45■□□□□ 0.38
LDLRAP1Q5SW96 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.45■□□□□ 0.38
LDLRAP1Q5SW96 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LDLRAP1Q5SW96 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LDLRAP1Q5SW96 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LDLRAP1Q5SW96 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LDLRAP1Q5SW96 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LDLRAP1Q5SW96 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.44■□□□□ 0.38
LDLRAP1Q5SW96 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LDLRAP1Q5SW96 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
LDLRAP1Q5SW96 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LDLRAP1Q5SW96 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LDLRAP1Q5SW96 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LDLRAP1Q5SW96 AC134043.2-201ENST00000624206 2238 ntBASIC17.44■□□□□ 0.38
LDLRAP1Q5SW96 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
LDLRAP1Q5SW96 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LDLRAP1Q5SW96 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LDLRAP1Q5SW96 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
LDLRAP1Q5SW96 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LDLRAP1Q5SW96 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.44■□□□□ 0.38
LDLRAP1Q5SW96 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LDLRAP1Q5SW96 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
LDLRAP1Q5SW96 SIRPAP1-201ENST00000448467 1770 ntBASIC17.44■□□□□ 0.38
LDLRAP1Q5SW96 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
LDLRAP1Q5SW96 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.44■□□□□ 0.38
LDLRAP1Q5SW96 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.44■□□□□ 0.38
LDLRAP1Q5SW96 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
LDLRAP1Q5SW96 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LDLRAP1Q5SW96 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.44■□□□□ 0.38
LDLRAP1Q5SW96 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LDLRAP1Q5SW96 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.44■□□□□ 0.38
LDLRAP1Q5SW96 AL450487.1-201ENST00000426799 995 ntBASIC17.44■□□□□ 0.38
LDLRAP1Q5SW96 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.44■□□□□ 0.38
LDLRAP1Q5SW96 KRT126P-201ENST00000549467 1181 ntBASIC17.44■□□□□ 0.38
LDLRAP1Q5SW96 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC17.44■□□□□ 0.38
LDLRAP1Q5SW96 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.44■□□□□ 0.38
LDLRAP1Q5SW96 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.44■□□□□ 0.38
LDLRAP1Q5SW96 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.44■□□□□ 0.38
LDLRAP1Q5SW96 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
LDLRAP1Q5SW96 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms