Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RUNDC3AQ59EK9 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
RUNDC3AQ59EK9 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
RUNDC3AQ59EK9 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
RUNDC3AQ59EK9 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
RUNDC3AQ59EK9 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RUNDC3AQ59EK9 FLJ38576-201ENST00000623820 2459 ntBASIC16.57■□□□□ 0.24
RUNDC3AQ59EK9 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
RUNDC3AQ59EK9 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.57■□□□□ 0.24
RUNDC3AQ59EK9 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RUNDC3AQ59EK9 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RUNDC3AQ59EK9 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.57■□□□□ 0.24
RUNDC3AQ59EK9 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RUNDC3AQ59EK9 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.57■□□□□ 0.24
RUNDC3AQ59EK9 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RUNDC3AQ59EK9 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RUNDC3AQ59EK9 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RUNDC3AQ59EK9 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RUNDC3AQ59EK9 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
RUNDC3AQ59EK9 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC16.57■□□□□ 0.24
RUNDC3AQ59EK9 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RUNDC3AQ59EK9 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.57■□□□□ 0.24
RUNDC3AQ59EK9 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.57■□□□□ 0.24
RUNDC3AQ59EK9 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC16.57■□□□□ 0.24
RUNDC3AQ59EK9 MTCL1P1-201ENST00000446207 792 ntBASIC16.57■□□□□ 0.24
RUNDC3AQ59EK9 AC068472.1-201ENST00000474589 881 ntBASIC16.57■□□□□ 0.24
RUNDC3AQ59EK9 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.57■□□□□ 0.24
RUNDC3AQ59EK9 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC16.57■□□□□ 0.24
RUNDC3AQ59EK9 AC140113.3-201ENST00000605663 199 ntBASIC16.57■□□□□ 0.24
RUNDC3AQ59EK9 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
RUNDC3AQ59EK9 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RUNDC3AQ59EK9 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
RUNDC3AQ59EK9 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
RUNDC3AQ59EK9 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
RUNDC3AQ59EK9 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
RUNDC3AQ59EK9 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RUNDC3AQ59EK9 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RUNDC3AQ59EK9 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RUNDC3AQ59EK9 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
RUNDC3AQ59EK9 AC005915.1-201ENST00000624912 2018 ntBASIC16.57■□□□□ 0.24
RUNDC3AQ59EK9 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RUNDC3AQ59EK9 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
RUNDC3AQ59EK9 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RUNDC3AQ59EK9 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
RUNDC3AQ59EK9 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.56■□□□□ 0.24
RUNDC3AQ59EK9 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RUNDC3AQ59EK9 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RUNDC3AQ59EK9 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RUNDC3AQ59EK9 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
RUNDC3AQ59EK9 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RUNDC3AQ59EK9 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RUNDC3AQ59EK9 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.56■□□□□ 0.24
RUNDC3AQ59EK9 PKD1P5-201ENST00000532415 10291 ntBASIC16.56■□□□□ 0.24
RUNDC3AQ59EK9 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RUNDC3AQ59EK9 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RUNDC3AQ59EK9 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RUNDC3AQ59EK9 IGHGP-201ENST00000390555 1178 ntBASIC16.56■□□□□ 0.24
RUNDC3AQ59EK9 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RUNDC3AQ59EK9 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
RUNDC3AQ59EK9 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC16.56■□□□□ 0.24
RUNDC3AQ59EK9 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC16.56■□□□□ 0.24
RUNDC3AQ59EK9 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
RUNDC3AQ59EK9 AC002558.1-201ENST00000488906 803 ntBASIC16.56■□□□□ 0.24
RUNDC3AQ59EK9 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RUNDC3AQ59EK9 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC16.56■□□□□ 0.24
RUNDC3AQ59EK9 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.56■□□□□ 0.24
RUNDC3AQ59EK9 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.56■□□□□ 0.24
RUNDC3AQ59EK9 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.56■□□□□ 0.24
RUNDC3AQ59EK9 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC16.56■□□□□ 0.24
RUNDC3AQ59EK9 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.56■□□□□ 0.24
RUNDC3AQ59EK9 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RUNDC3AQ59EK9 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.56■□□□□ 0.24
RUNDC3AQ59EK9 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RUNDC3AQ59EK9 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RUNDC3AQ59EK9 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RUNDC3AQ59EK9 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RUNDC3AQ59EK9 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
RUNDC3AQ59EK9 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RUNDC3AQ59EK9 UBALD1-205ENST00000590891 2641 ntBASIC16.56■□□□□ 0.24
RUNDC3AQ59EK9 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RUNDC3AQ59EK9 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RUNDC3AQ59EK9 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RUNDC3AQ59EK9 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RUNDC3AQ59EK9 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.56■□□□□ 0.24
RUNDC3AQ59EK9 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RUNDC3AQ59EK9 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
RUNDC3AQ59EK9 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RUNDC3AQ59EK9 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.55■□□□□ 0.24
RUNDC3AQ59EK9 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
RUNDC3AQ59EK9 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RUNDC3AQ59EK9 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RUNDC3AQ59EK9 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.55■□□□□ 0.24
RUNDC3AQ59EK9 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RUNDC3AQ59EK9 PCDHB19P-201ENST00000570871 2371 ntBASIC16.55■□□□□ 0.24
RUNDC3AQ59EK9 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
RUNDC3AQ59EK9 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.55■□□□□ 0.24
RUNDC3AQ59EK9 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RUNDC3AQ59EK9 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RUNDC3AQ59EK9 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RUNDC3AQ59EK9 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms