Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC14.59□□□□□ -0.07
ANKRD55Q3KP44 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC14.59□□□□□ -0.07
ANKRD55Q3KP44 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC14.59□□□□□ -0.07
ANKRD55Q3KP44 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ANKRD55Q3KP44 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC14.59□□□□□ -0.07
ANKRD55Q3KP44 CD177P1-201ENST00000606252 935 ntBASIC14.59□□□□□ -0.07
ANKRD55Q3KP44 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
ANKRD55Q3KP44 AL596257.1-201ENST00000641463 2694 ntBASIC14.59□□□□□ -0.07
ANKRD55Q3KP44 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
ANKRD55Q3KP44 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ANKRD55Q3KP44 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ANKRD55Q3KP44 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ANKRD55Q3KP44 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC14.59□□□□□ -0.07
ANKRD55Q3KP44 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ANKRD55Q3KP44 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC14.59□□□□□ -0.07
ANKRD55Q3KP44 RNF216P1-203ENST00000404404 2427 ntBASIC14.58□□□□□ -0.07
ANKRD55Q3KP44 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC14.58□□□□□ -0.07
ANKRD55Q3KP44 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
ANKRD55Q3KP44 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
ANKRD55Q3KP44 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
ANKRD55Q3KP44 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
ANKRD55Q3KP44 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC14.58□□□□□ -0.07
ANKRD55Q3KP44 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
ANKRD55Q3KP44 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
ANKRD55Q3KP44 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC14.58□□□□□ -0.07
ANKRD55Q3KP44 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC14.58□□□□□ -0.07
ANKRD55Q3KP44 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
ANKRD55Q3KP44 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
ANKRD55Q3KP44 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ANKRD55Q3KP44 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
ANKRD55Q3KP44 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
ANKRD55Q3KP44 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ANKRD55Q3KP44 AC006449.5-201ENST00000610658 2098 ntBASIC14.58□□□□□ -0.08
ANKRD55Q3KP44 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC14.58□□□□□ -0.08
ANKRD55Q3KP44 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ANKRD55Q3KP44 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ANKRD55Q3KP44 AC092171.3-201ENST00000610122 2651 ntBASIC14.58□□□□□ -0.08
ANKRD55Q3KP44 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ANKRD55Q3KP44 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC14.58□□□□□ -0.08
ANKRD55Q3KP44 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ANKRD55Q3KP44 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ANKRD55Q3KP44 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
ANKRD55Q3KP44 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC14.58□□□□□ -0.08
ANKRD55Q3KP44 SAPCD2P4-201ENST00000424595 1171 ntBASIC14.58□□□□□ -0.08
ANKRD55Q3KP44 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
ANKRD55Q3KP44 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ANKRD55Q3KP44 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC14.58□□□□□ -0.08
ANKRD55Q3KP44 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
ANKRD55Q3KP44 CR769767.2-201ENST00000622735 460 ntBASIC14.58□□□□□ -0.08
ANKRD55Q3KP44 AC112497.1-201ENST00000624824 639 ntBASIC14.58□□□□□ -0.08
ANKRD55Q3KP44 DECR2-212ENST00000627716 352 ntTSL 2 BASIC14.58□□□□□ -0.08
ANKRD55Q3KP44 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC14.58□□□□□ -0.08
ANKRD55Q3KP44 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
ANKRD55Q3KP44 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ANKRD55Q3KP44 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
ANKRD55Q3KP44 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
ANKRD55Q3KP44 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ANKRD55Q3KP44 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
ANKRD55Q3KP44 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
ANKRD55Q3KP44 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ANKRD55Q3KP44 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ANKRD55Q3KP44 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ANKRD55Q3KP44 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ANKRD55Q3KP44 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
ANKRD55Q3KP44 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
ANKRD55Q3KP44 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ANKRD55Q3KP44 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC14.58□□□□□ -0.08
ANKRD55Q3KP44 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ANKRD55Q3KP44 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ANKRD55Q3KP44 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC14.58□□□□□ -0.08
ANKRD55Q3KP44 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
ANKRD55Q3KP44 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ANKRD55Q3KP44 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
ANKRD55Q3KP44 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC14.57□□□□□ -0.08
ANKRD55Q3KP44 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ANKRD55Q3KP44 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC14.57□□□□□ -0.08
ANKRD55Q3KP44 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ANKRD55Q3KP44 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
ANKRD55Q3KP44 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC14.57□□□□□ -0.08
ANKRD55Q3KP44 BANP-204ENST00000393208 2283 ntTSL 2 BASIC14.57□□□□□ -0.08
ANKRD55Q3KP44 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC14.57□□□□□ -0.08
ANKRD55Q3KP44 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ANKRD55Q3KP44 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
ANKRD55Q3KP44 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ANKRD55Q3KP44 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ANKRD55Q3KP44 SNORA78-201ENST00000459373 127 ntBASIC14.57□□□□□ -0.08
ANKRD55Q3KP44 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC14.57□□□□□ -0.08
ANKRD55Q3KP44 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC14.57□□□□□ -0.08
ANKRD55Q3KP44 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC14.57□□□□□ -0.08
ANKRD55Q3KP44 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
ANKRD55Q3KP44 DGCR10-201ENST00000609839 495 ntBASIC14.57□□□□□ -0.08
ANKRD55Q3KP44 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
ANKRD55Q3KP44 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
ANKRD55Q3KP44 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ANKRD55Q3KP44 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
ANKRD55Q3KP44 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ANKRD55Q3KP44 SRI-203ENST00000419179 1307 ntTSL 2 BASIC14.57□□□□□ -0.08
ANKRD55Q3KP44 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC14.57□□□□□ -0.08
ANKRD55Q3KP44 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ANKRD55Q3KP44 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms