Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 TERC-201ENST00000602385 541 ntBASIC21.1■□□□□ 0.97
RFX7Q2KHR2 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RFX7Q2KHR2 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC21.1■□□□□ 0.97
RFX7Q2KHR2 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC21.1■□□□□ 0.97
RFX7Q2KHR2 AC116353.5-201ENST00000638148 1699 ntBASIC21.1■□□□□ 0.97
RFX7Q2KHR2 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RFX7Q2KHR2 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RFX7Q2KHR2 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
RFX7Q2KHR2 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
RFX7Q2KHR2 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RFX7Q2KHR2 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RFX7Q2KHR2 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
RFX7Q2KHR2 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RFX7Q2KHR2 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RFX7Q2KHR2 LETM1P2-201ENST00000597330 2178 ntBASIC21.1■□□□□ 0.97
RFX7Q2KHR2 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RFX7Q2KHR2 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
RFX7Q2KHR2 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
RFX7Q2KHR2 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
RFX7Q2KHR2 MED15P5-201ENST00000423150 992 ntBASIC21.1■□□□□ 0.97
RFX7Q2KHR2 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC21.1■□□□□ 0.97
RFX7Q2KHR2 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC21.1■□□□□ 0.97
RFX7Q2KHR2 STK19B-204ENST00000512515 211 ntBASIC21.1■□□□□ 0.97
RFX7Q2KHR2 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC21.1■□□□□ 0.97
RFX7Q2KHR2 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RFX7Q2KHR2 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC21.1■□□□□ 0.97
RFX7Q2KHR2 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RFX7Q2KHR2 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC21.1■□□□□ 0.97
RFX7Q2KHR2 AC027601.4-201ENST00000611259 610 ntBASIC21.1■□□□□ 0.97
RFX7Q2KHR2 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RFX7Q2KHR2 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
RFX7Q2KHR2 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RFX7Q2KHR2 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
RFX7Q2KHR2 AC148477.5-201ENST00000625164 1645 ntBASIC21.09■□□□□ 0.97
RFX7Q2KHR2 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RFX7Q2KHR2 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
RFX7Q2KHR2 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RFX7Q2KHR2 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RFX7Q2KHR2 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
RFX7Q2KHR2 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
RFX7Q2KHR2 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
RFX7Q2KHR2 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC21.09■□□□□ 0.97
RFX7Q2KHR2 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
RFX7Q2KHR2 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RFX7Q2KHR2 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RFX7Q2KHR2 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
RFX7Q2KHR2 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
RFX7Q2KHR2 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
RFX7Q2KHR2 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC21.09■□□□□ 0.97
RFX7Q2KHR2 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RFX7Q2KHR2 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC21.09■□□□□ 0.97
RFX7Q2KHR2 AC009947.1-201ENST00000444350 727 ntBASIC21.09■□□□□ 0.97
RFX7Q2KHR2 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC21.09■□□□□ 0.97
RFX7Q2KHR2 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC21.09■□□□□ 0.97
RFX7Q2KHR2 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC21.09■□□□□ 0.97
RFX7Q2KHR2 NMU-202ENST00000505262 693 ntTSL 3 BASIC21.09■□□□□ 0.97
RFX7Q2KHR2 UNC93B6-202ENST00000528242 690 ntBASIC21.09■□□□□ 0.97
RFX7Q2KHR2 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
RFX7Q2KHR2 AL356488.2-201ENST00000602755 427 ntBASIC21.09■□□□□ 0.97
RFX7Q2KHR2 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RFX7Q2KHR2 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RFX7Q2KHR2 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
RFX7Q2KHR2 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC21.08■□□□□ 0.97
RFX7Q2KHR2 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC21.08■□□□□ 0.97
RFX7Q2KHR2 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
RFX7Q2KHR2 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
RFX7Q2KHR2 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC21.08■□□□□ 0.97
RFX7Q2KHR2 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RFX7Q2KHR2 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
RFX7Q2KHR2 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
RFX7Q2KHR2 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
RFX7Q2KHR2 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC21.08■□□□□ 0.96
RFX7Q2KHR2 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC21.08■□□□□ 0.96
RFX7Q2KHR2 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RFX7Q2KHR2 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
RFX7Q2KHR2 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC21.08■□□□□ 0.96
RFX7Q2KHR2 PRYP5-201ENST00000451909 266 ntBASIC21.08■□□□□ 0.96
RFX7Q2KHR2 MSRA-206ENST00000521209 814 ntTSL 3 BASIC21.08■□□□□ 0.96
RFX7Q2KHR2 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC21.08■□□□□ 0.96
RFX7Q2KHR2 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC21.08■□□□□ 0.96
RFX7Q2KHR2 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC21.08■□□□□ 0.96
RFX7Q2KHR2 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
RFX7Q2KHR2 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RFX7Q2KHR2 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
RFX7Q2KHR2 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC21.08■□□□□ 0.96
RFX7Q2KHR2 FST-202ENST00000396947 2538 ntTSL 5 BASIC21.07■□□□□ 0.96
RFX7Q2KHR2 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
RFX7Q2KHR2 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
RFX7Q2KHR2 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RFX7Q2KHR2 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC21.07■□□□□ 0.96
RFX7Q2KHR2 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RFX7Q2KHR2 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RFX7Q2KHR2 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RFX7Q2KHR2 CROCCP2-202ENST00000412962 2773 ntBASIC21.07■□□□□ 0.96
RFX7Q2KHR2 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RFX7Q2KHR2 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RFX7Q2KHR2 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RFX7Q2KHR2 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RFX7Q2KHR2 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC21.07■□□□□ 0.96
RFX7Q2KHR2 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms