Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.91■□□□□ 0.3
HMGCS1Q01581 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.91■□□□□ 0.3
HMGCS1Q01581 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.91■□□□□ 0.3
HMGCS1Q01581 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HMGCS1Q01581 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.91■□□□□ 0.3
HMGCS1Q01581 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.91■□□□□ 0.3
HMGCS1Q01581 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.91■□□□□ 0.3
HMGCS1Q01581 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HMGCS1Q01581 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
HMGCS1Q01581 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HMGCS1Q01581 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HMGCS1Q01581 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
HMGCS1Q01581 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
HMGCS1Q01581 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HMGCS1Q01581 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.9■□□□□ 0.3
HMGCS1Q01581 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HMGCS1Q01581 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.9■□□□□ 0.3
HMGCS1Q01581 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.9■□□□□ 0.3
HMGCS1Q01581 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
HMGCS1Q01581 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HMGCS1Q01581 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.9■□□□□ 0.3
HMGCS1Q01581 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HMGCS1Q01581 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HMGCS1Q01581 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
HMGCS1Q01581 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.9■□□□□ 0.3
HMGCS1Q01581 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.9■□□□□ 0.3
HMGCS1Q01581 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
HMGCS1Q01581 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.9■□□□□ 0.3
HMGCS1Q01581 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
HMGCS1Q01581 NKILA-202ENST00000614771 2598 ntBASIC16.9■□□□□ 0.3
HMGCS1Q01581 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
HMGCS1Q01581 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
HMGCS1Q01581 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
HMGCS1Q01581 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HMGCS1Q01581 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HMGCS1Q01581 AC011676.5-201ENST00000624864 2660 ntBASIC16.9■□□□□ 0.3
HMGCS1Q01581 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
HMGCS1Q01581 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
HMGCS1Q01581 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
HMGCS1Q01581 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
HMGCS1Q01581 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HMGCS1Q01581 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.3
HMGCS1Q01581 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.3
HMGCS1Q01581 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
HMGCS1Q01581 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
HMGCS1Q01581 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.89■□□□□ 0.3
HMGCS1Q01581 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
HMGCS1Q01581 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
HMGCS1Q01581 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HMGCS1Q01581 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.89■□□□□ 0.29
HMGCS1Q01581 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HMGCS1Q01581 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HMGCS1Q01581 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HMGCS1Q01581 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HMGCS1Q01581 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HMGCS1Q01581 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.89■□□□□ 0.29
HMGCS1Q01581 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.89■□□□□ 0.29
HMGCS1Q01581 TSPY22P-201ENST00000427496 604 ntBASIC16.89■□□□□ 0.29
HMGCS1Q01581 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
HMGCS1Q01581 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HMGCS1Q01581 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.89■□□□□ 0.29
HMGCS1Q01581 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
HMGCS1Q01581 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.89■□□□□ 0.29
HMGCS1Q01581 AL139327.4-201ENST00000612362 153 ntBASIC16.89■□□□□ 0.29
HMGCS1Q01581 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HMGCS1Q01581 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.89■□□□□ 0.29
HMGCS1Q01581 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.89■□□□□ 0.29
HMGCS1Q01581 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.89■□□□□ 0.29
HMGCS1Q01581 AC084018.2-201ENST00000613093 2607 ntBASIC16.89■□□□□ 0.29
HMGCS1Q01581 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HMGCS1Q01581 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.89■□□□□ 0.29
HMGCS1Q01581 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
HMGCS1Q01581 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HMGCS1Q01581 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.89■□□□□ 0.29
HMGCS1Q01581 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.89■□□□□ 0.29
HMGCS1Q01581 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HMGCS1Q01581 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
HMGCS1Q01581 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
HMGCS1Q01581 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
HMGCS1Q01581 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
HMGCS1Q01581 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
HMGCS1Q01581 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HMGCS1Q01581 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HMGCS1Q01581 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
HMGCS1Q01581 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HMGCS1Q01581 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
HMGCS1Q01581 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.88■□□□□ 0.29
HMGCS1Q01581 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HMGCS1Q01581 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HMGCS1Q01581 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HMGCS1Q01581 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
HMGCS1Q01581 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.88■□□□□ 0.29
HMGCS1Q01581 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
HMGCS1Q01581 COX5BP2-201ENST00000392354 334 ntBASIC16.88■□□□□ 0.29
HMGCS1Q01581 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
HMGCS1Q01581 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.88■□□□□ 0.29
HMGCS1Q01581 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.88■□□□□ 0.29
HMGCS1Q01581 GUSBP12-201ENST00000513727 720 ntBASIC16.88■□□□□ 0.29
HMGCS1Q01581 NTF6B-201ENST00000591913 560 ntBASIC16.88■□□□□ 0.29
HMGCS1Q01581 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms