Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.61■□□□□ 0.25
GABREP78334 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GABREP78334 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
GABREP78334 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
GABREP78334 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GABREP78334 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.61■□□□□ 0.25
GABREP78334 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
GABREP78334 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
GABREP78334 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
GABREP78334 PHGDH-209ENST00000641074 1780 ntBASIC16.61■□□□□ 0.25
GABREP78334 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
GABREP78334 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
GABREP78334 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
GABREP78334 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.61■□□□□ 0.25
GABREP78334 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC16.61■□□□□ 0.25
GABREP78334 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
GABREP78334 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
GABREP78334 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
GABREP78334 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
GABREP78334 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.6■□□□□ 0.25
GABREP78334 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
GABREP78334 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
GABREP78334 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
GABREP78334 WIZP1-201ENST00000531444 2299 ntBASIC16.6■□□□□ 0.25
GABREP78334 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.6■□□□□ 0.25
GABREP78334 AL139400.1-201ENST00000366220 510 ntBASIC16.6■□□□□ 0.25
GABREP78334 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
GABREP78334 AP002414.1-201ENST00000391405 1147 ntBASIC16.6■□□□□ 0.25
GABREP78334 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
GABREP78334 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.6■□□□□ 0.25
GABREP78334 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
GABREP78334 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
GABREP78334 STK19B-204ENST00000512515 211 ntBASIC16.6■□□□□ 0.25
GABREP78334 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.6■□□□□ 0.25
GABREP78334 AC109462.3-201ENST00000573934 613 ntBASIC16.6■□□□□ 0.25
GABREP78334 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
GABREP78334 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.6■□□□□ 0.25
GABREP78334 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.6■□□□□ 0.25
GABREP78334 AC239800.4-201ENST00000603712 296 ntBASIC16.6■□□□□ 0.25
GABREP78334 AC023141.13-201ENST00000604991 943 ntBASIC16.6■□□□□ 0.25
GABREP78334 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.6■□□□□ 0.25
GABREP78334 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
GABREP78334 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
GABREP78334 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC16.6■□□□□ 0.25
GABREP78334 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
GABREP78334 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.6■□□□□ 0.25
GABREP78334 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
GABREP78334 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
GABREP78334 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
GABREP78334 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.6■□□□□ 0.25
GABREP78334 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
GABREP78334 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
GABREP78334 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
GABREP78334 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
GABREP78334 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
GABREP78334 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.6■□□□□ 0.25
GABREP78334 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
GABREP78334 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
GABREP78334 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
GABREP78334 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
GABREP78334 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
GABREP78334 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
GABREP78334 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
GABREP78334 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
GABREP78334 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
GABREP78334 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.59■□□□□ 0.25
GABREP78334 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.59■□□□□ 0.25
GABREP78334 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
GABREP78334 AC097637.2-201ENST00000624096 1997 ntBASIC16.59■□□□□ 0.25
GABREP78334 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
GABREP78334 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.59■□□□□ 0.25
GABREP78334 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
GABREP78334 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.59■□□□□ 0.25
GABREP78334 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.59■□□□□ 0.25
GABREP78334 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
GABREP78334 RHOQP3-201ENST00000437982 621 ntBASIC16.59■□□□□ 0.25
GABREP78334 BCRP1-201ENST00000444246 691 ntBASIC16.59■□□□□ 0.25
GABREP78334 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.59■□□□□ 0.25
GABREP78334 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.59■□□□□ 0.25
GABREP78334 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
GABREP78334 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.59■□□□□ 0.25
GABREP78334 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.59■□□□□ 0.25
GABREP78334 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.59■□□□□ 0.25
GABREP78334 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.59■□□□□ 0.25
GABREP78334 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.59■□□□□ 0.25
GABREP78334 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
GABREP78334 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
GABREP78334 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
GABREP78334 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
GABREP78334 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.59■□□□□ 0.25
GABREP78334 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.59■□□□□ 0.25
GABREP78334 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.59■□□□□ 0.25
GABREP78334 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
GABREP78334 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
GABREP78334 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
GABREP78334 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
GABREP78334 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
GABREP78334 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
GABREP78334 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
GABREP78334 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms