Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LBX1P52954 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LBX1P52954 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LBX1P52954 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
LBX1P52954 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LBX1P52954 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LBX1P52954 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LBX1P52954 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.56■□□□□ 0.72
LBX1P52954 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.56■□□□□ 0.72
LBX1P52954 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.56■□□□□ 0.72
LBX1P52954 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LBX1P52954 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LBX1P52954 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC19.56■□□□□ 0.72
LBX1P52954 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC19.56■□□□□ 0.72
LBX1P52954 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LBX1P52954 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC19.56■□□□□ 0.72
LBX1P52954 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC19.56■□□□□ 0.72
LBX1P52954 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC19.56■□□□□ 0.72
LBX1P52954 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC19.56■□□□□ 0.72
LBX1P52954 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC19.56■□□□□ 0.72
LBX1P52954 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC19.56■□□□□ 0.72
LBX1P52954 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC19.56■□□□□ 0.72
LBX1P52954 AC007967.4-201ENST00000614700 386 ntBASIC19.56■□□□□ 0.72
LBX1P52954 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC19.56■□□□□ 0.72
LBX1P52954 AC005082.1-201ENST00000413042 2259 ntBASIC19.56■□□□□ 0.72
LBX1P52954 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LBX1P52954 WASH6P-202ENST00000359512 1437 ntBASIC19.56■□□□□ 0.72
LBX1P52954 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LBX1P52954 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LBX1P52954 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC19.56■□□□□ 0.72
LBX1P52954 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
LBX1P52954 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LBX1P52954 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LBX1P52954 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LBX1P52954 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LBX1P52954 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LBX1P52954 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.55■□□□□ 0.72
LBX1P52954 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.55■□□□□ 0.72
LBX1P52954 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
LBX1P52954 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
LBX1P52954 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
LBX1P52954 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LBX1P52954 SPDYE19P-201ENST00000338590 713 ntBASIC19.55■□□□□ 0.72
LBX1P52954 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
LBX1P52954 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC19.55■□□□□ 0.72
LBX1P52954 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LBX1P52954 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LBX1P52954 OSM-203ENST00000403463 464 ntTSL 3 BASIC19.55■□□□□ 0.72
LBX1P52954 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
LBX1P52954 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LBX1P52954 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC19.55■□□□□ 0.72
LBX1P52954 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.55■□□□□ 0.72
LBX1P52954 FOS-206ENST00000555347 1280 ntTSL 2 BASIC19.55■□□□□ 0.72
LBX1P52954 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
LBX1P52954 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
LBX1P52954 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC19.55■□□□□ 0.72
LBX1P52954 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC19.55■□□□□ 0.72
LBX1P52954 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LBX1P52954 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
LBX1P52954 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
LBX1P52954 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.55■□□□□ 0.72
LBX1P52954 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LBX1P52954 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC19.54■□□□□ 0.72
LBX1P52954 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.54■□□□□ 0.72
LBX1P52954 CLDN5-201ENST00000403084 2357 ntBASIC19.54■□□□□ 0.72
LBX1P52954 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LBX1P52954 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC19.54■□□□□ 0.72
LBX1P52954 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC19.54■□□□□ 0.72
LBX1P52954 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC19.54■□□□□ 0.72
LBX1P52954 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
LBX1P52954 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC19.54■□□□□ 0.72
LBX1P52954 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LBX1P52954 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
LBX1P52954 AC107918.2-201ENST00000530817 355 ntBASIC19.54■□□□□ 0.72
LBX1P52954 MMP17-203ENST00000535004 719 ntTSL 3 BASIC19.54■□□□□ 0.72
LBX1P52954 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LBX1P52954 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC19.54■□□□□ 0.72
LBX1P52954 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC19.54■□□□□ 0.72
LBX1P52954 TEX28P1-201ENST00000613479 1221 ntBASIC19.54■□□□□ 0.72
LBX1P52954 TEX28P2-201ENST00000617764 1221 ntBASIC19.54■□□□□ 0.72
LBX1P52954 SNX1-214ENST00000625244 324 ntTSL 5 BASIC19.54■□□□□ 0.72
LBX1P52954 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
LBX1P52954 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LBX1P52954 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.54■□□□□ 0.72
LBX1P52954 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
LBX1P52954 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
LBX1P52954 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LBX1P52954 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LBX1P52954 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.54■□□□□ 0.72
LBX1P52954 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LBX1P52954 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.53■□□□□ 0.72
LBX1P52954 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
LBX1P52954 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LBX1P52954 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
LBX1P52954 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LBX1P52954 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
LBX1P52954 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LBX1P52954 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LBX1P52954 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LBX1P52954 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms