Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC15.62■□□□□ 0.09
CSNK1A1P48729 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CSNK1A1P48729 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CSNK1A1P48729 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CSNK1A1P48729 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC15.62■□□□□ 0.09
CSNK1A1P48729 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC15.62■□□□□ 0.09
CSNK1A1P48729 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CSNK1A1P48729 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC15.62■□□□□ 0.09
CSNK1A1P48729 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CSNK1A1P48729 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CSNK1A1P48729 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC15.62■□□□□ 0.09
CSNK1A1P48729 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC15.62■□□□□ 0.09
CSNK1A1P48729 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CSNK1A1P48729 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CSNK1A1P48729 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC15.62■□□□□ 0.09
CSNK1A1P48729 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CSNK1A1P48729 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CSNK1A1P48729 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CSNK1A1P48729 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
CSNK1A1P48729 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC15.61■□□□□ 0.09
CSNK1A1P48729 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
CSNK1A1P48729 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CSNK1A1P48729 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CSNK1A1P48729 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
CSNK1A1P48729 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CSNK1A1P48729 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC15.61■□□□□ 0.09
CSNK1A1P48729 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC15.61■□□□□ 0.09
CSNK1A1P48729 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CSNK1A1P48729 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC15.61■□□□□ 0.09
CSNK1A1P48729 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC15.61■□□□□ 0.09
CSNK1A1P48729 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC15.61■□□□□ 0.09
CSNK1A1P48729 AC096582.2-201ENST00000510860 516 ntBASIC15.61■□□□□ 0.09
CSNK1A1P48729 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC15.61■□□□□ 0.09
CSNK1A1P48729 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC15.61■□□□□ 0.09
CSNK1A1P48729 MPI-205ENST00000562606 1052 ntTSL 3 BASIC15.61■□□□□ 0.09
CSNK1A1P48729 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC15.61■□□□□ 0.09
CSNK1A1P48729 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
CSNK1A1P48729 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC15.61■□□□□ 0.09
CSNK1A1P48729 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
CSNK1A1P48729 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
CSNK1A1P48729 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC15.61■□□□□ 0.09
CSNK1A1P48729 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC15.61■□□□□ 0.09
CSNK1A1P48729 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CSNK1A1P48729 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CSNK1A1P48729 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CSNK1A1P48729 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC15.61■□□□□ 0.09
CSNK1A1P48729 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CSNK1A1P48729 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
CSNK1A1P48729 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CSNK1A1P48729 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CSNK1A1P48729 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CSNK1A1P48729 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC15.61■□□□□ 0.09
CSNK1A1P48729 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CSNK1A1P48729 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CSNK1A1P48729 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CSNK1A1P48729 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CSNK1A1P48729 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CSNK1A1P48729 HARS-201ENST00000307633 1780 ntTSL 2 BASIC15.6■□□□□ 0.09
CSNK1A1P48729 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
CSNK1A1P48729 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CSNK1A1P48729 MYCLP1-201ENST00000372451 1075 ntBASIC15.6■□□□□ 0.09
CSNK1A1P48729 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC15.6■□□□□ 0.09
CSNK1A1P48729 AC103564.2-201ENST00000432853 1299 ntBASIC15.6■□□□□ 0.09
CSNK1A1P48729 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
CSNK1A1P48729 CDV3-207ENST00000508481 661 ntTSL 3 BASIC15.6■□□□□ 0.09
CSNK1A1P48729 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CSNK1A1P48729 AC012615.1-201ENST00000565797 1299 ntBASIC15.6■□□□□ 0.09
CSNK1A1P48729 AC111152.3-201ENST00000569699 673 ntBASIC15.6■□□□□ 0.09
CSNK1A1P48729 AC109462.3-201ENST00000573934 613 ntBASIC15.6■□□□□ 0.09
CSNK1A1P48729 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC15.6■□□□□ 0.09
CSNK1A1P48729 AC011467.2-201ENST00000598425 242 ntBASIC15.6■□□□□ 0.09
CSNK1A1P48729 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC15.6■□□□□ 0.09
CSNK1A1P48729 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CSNK1A1P48729 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CSNK1A1P48729 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
CSNK1A1P48729 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CSNK1A1P48729 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
CSNK1A1P48729 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
CSNK1A1P48729 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CSNK1A1P48729 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.6■□□□□ 0.09
CSNK1A1P48729 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC15.6■□□□□ 0.09
CSNK1A1P48729 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC15.6■□□□□ 0.09
CSNK1A1P48729 SIRPAP1-201ENST00000448467 1770 ntBASIC15.59■□□□□ 0.09
CSNK1A1P48729 TP73-AS1-210ENST00000637775 1455 ntBASIC15.59■□□□□ 0.09
CSNK1A1P48729 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CSNK1A1P48729 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC15.59■□□□□ 0.09
CSNK1A1P48729 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CSNK1A1P48729 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
CSNK1A1P48729 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CSNK1A1P48729 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CSNK1A1P48729 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CSNK1A1P48729 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CSNK1A1P48729 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC15.59■□□□□ 0.09
CSNK1A1P48729 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CSNK1A1P48729 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
CSNK1A1P48729 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CSNK1A1P48729 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CSNK1A1P48729 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CSNK1A1P48729 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CSNK1A1P48729 CCS-201ENST00000310190 942 ntTSL 5 BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms