Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC20.61■□□□□ 0.89
NEDD4P46934 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC20.61■□□□□ 0.89
NEDD4P46934 SLC25A6P4-201ENST00000586535 553 ntBASIC20.61■□□□□ 0.89
NEDD4P46934 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NEDD4P46934 CYGB-205ENST00000590175 830 ntTSL 3 BASIC20.61■□□□□ 0.89
NEDD4P46934 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
NEDD4P46934 COPE-211ENST00000600932 1144 ntTSL 5 BASIC20.61■□□□□ 0.89
NEDD4P46934 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
NEDD4P46934 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
NEDD4P46934 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.61■□□□□ 0.89
NEDD4P46934 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
NEDD4P46934 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NEDD4P46934 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NEDD4P46934 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
NEDD4P46934 AL645608.8-201ENST00000606034 2086 ntBASIC20.61■□□□□ 0.89
NEDD4P46934 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC20.61■□□□□ 0.89
NEDD4P46934 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NEDD4P46934 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC20.6■□□□□ 0.89
NEDD4P46934 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NEDD4P46934 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
NEDD4P46934 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NEDD4P46934 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NEDD4P46934 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
NEDD4P46934 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NEDD4P46934 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NEDD4P46934 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
NEDD4P46934 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
NEDD4P46934 HNRNPDP1-201ENST00000439535 754 ntBASIC20.6■□□□□ 0.89
NEDD4P46934 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
NEDD4P46934 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC20.6■□□□□ 0.89
NEDD4P46934 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
NEDD4P46934 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
NEDD4P46934 MTDHP4-201ENST00000600287 670 ntBASIC20.6■□□□□ 0.89
NEDD4P46934 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
NEDD4P46934 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NEDD4P46934 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NEDD4P46934 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
NEDD4P46934 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC20.6■□□□□ 0.89
NEDD4P46934 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
NEDD4P46934 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
NEDD4P46934 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NEDD4P46934 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NEDD4P46934 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
NEDD4P46934 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NEDD4P46934 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC20.6■□□□□ 0.89
NEDD4P46934 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
NEDD4P46934 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC20.59■□□□□ 0.89
NEDD4P46934 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
NEDD4P46934 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC20.59■□□□□ 0.89
NEDD4P46934 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NEDD4P46934 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC20.59■□□□□ 0.89
NEDD4P46934 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
NEDD4P46934 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NEDD4P46934 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NEDD4P46934 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC20.59■□□□□ 0.89
NEDD4P46934 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
NEDD4P46934 SCARNA2-201ENST00000458748 420 ntBASIC20.59■□□□□ 0.89
NEDD4P46934 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NEDD4P46934 MOK-208ENST00000519058 917 ntTSL 2 BASIC20.59■□□□□ 0.89
NEDD4P46934 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC20.59■□□□□ 0.89
NEDD4P46934 RNF151-202ENST00000569210 853 ntTSL 2 BASIC20.59■□□□□ 0.89
NEDD4P46934 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
NEDD4P46934 AL022326.1-202ENST00000641533 845 ntBASIC20.59■□□□□ 0.89
NEDD4P46934 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NEDD4P46934 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
NEDD4P46934 AL135999.2-201ENST00000622438 1686 ntBASIC20.59■□□□□ 0.89
NEDD4P46934 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
NEDD4P46934 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC20.59■□□□□ 0.89
NEDD4P46934 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
NEDD4P46934 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC20.59■□□□□ 0.89
NEDD4P46934 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC20.59■□□□□ 0.89
NEDD4P46934 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NEDD4P46934 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
NEDD4P46934 CROCCP2-202ENST00000412962 2773 ntBASIC20.59■□□□□ 0.89
NEDD4P46934 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NEDD4P46934 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
NEDD4P46934 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
NEDD4P46934 ENSA-206ENST00000361631 725 ntTSL 2 BASIC20.58■□□□□ 0.89
NEDD4P46934 KRT18P67-201ENST00000432816 1264 ntBASIC20.58■□□□□ 0.89
NEDD4P46934 RNPS1P1-201ENST00000507437 918 ntBASIC20.58■□□□□ 0.89
NEDD4P46934 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC20.58■□□□□ 0.89
NEDD4P46934 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
NEDD4P46934 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC20.58■□□□□ 0.89
NEDD4P46934 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC20.58■□□□□ 0.89
NEDD4P46934 PNMT-203ENST00000581428 677 ntTSL 2 BASIC20.58■□□□□ 0.89
NEDD4P46934 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC20.58■□□□□ 0.89
NEDD4P46934 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
NEDD4P46934 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NEDD4P46934 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC20.58■□□□□ 0.89
NEDD4P46934 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
NEDD4P46934 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
NEDD4P46934 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NEDD4P46934 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
NEDD4P46934 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
NEDD4P46934 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC20.58■□□□□ 0.88
NEDD4P46934 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
NEDD4P46934 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
NEDD4P46934 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC20.58■□□□□ 0.88
NEDD4P46934 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NEDD4P46934 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms