Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.68■□□□□ 0.58
SSR1P43307 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SSR1P43307 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SSR1P43307 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SSR1P43307 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SSR1P43307 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
SSR1P43307 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SSR1P43307 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SSR1P43307 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SSR1P43307 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.68■□□□□ 0.58
SSR1P43307 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.68■□□□□ 0.58
SSR1P43307 VENTXP5-201ENST00000523979 775 ntBASIC18.68■□□□□ 0.58
SSR1P43307 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.68■□□□□ 0.58
SSR1P43307 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.68■□□□□ 0.58
SSR1P43307 AC009154.2-201ENST00000621177 724 ntBASIC18.68■□□□□ 0.58
SSR1P43307 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SSR1P43307 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.68■□□□□ 0.58
SSR1P43307 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
SSR1P43307 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SSR1P43307 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SSR1P43307 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
SSR1P43307 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SSR1P43307 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.68■□□□□ 0.58
SSR1P43307 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
SSR1P43307 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SSR1P43307 AL353692.3-201ENST00000407031 1396 ntBASIC18.68■□□□□ 0.58
SSR1P43307 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SSR1P43307 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
SSR1P43307 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SSR1P43307 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.67■□□□□ 0.58
SSR1P43307 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.67■□□□□ 0.58
SSR1P43307 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
SSR1P43307 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SSR1P43307 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SSR1P43307 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.67■□□□□ 0.58
SSR1P43307 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SSR1P43307 AC133963.1-201ENST00000504166 1679 ntBASIC18.67■□□□□ 0.58
SSR1P43307 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
SSR1P43307 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SSR1P43307 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SSR1P43307 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SSR1P43307 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
SSR1P43307 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SSR1P43307 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SSR1P43307 HBZP1-201ENST00000354915 429 ntBASIC18.67■□□□□ 0.58
SSR1P43307 IGHGP-201ENST00000390555 1178 ntBASIC18.67■□□□□ 0.58
SSR1P43307 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.67■□□□□ 0.58
SSR1P43307 AC104076.2-201ENST00000448912 469 ntBASIC18.67■□□□□ 0.58
SSR1P43307 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.67■□□□□ 0.58
SSR1P43307 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.67■□□□□ 0.58
SSR1P43307 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.67■□□□□ 0.58
SSR1P43307 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SSR1P43307 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SSR1P43307 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SSR1P43307 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SSR1P43307 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.67■□□□□ 0.58
SSR1P43307 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SSR1P43307 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
SSR1P43307 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.67■□□□□ 0.58
SSR1P43307 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.67■□□□□ 0.58
SSR1P43307 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.67■□□□□ 0.58
SSR1P43307 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.66■□□□□ 0.58
SSR1P43307 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SSR1P43307 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SSR1P43307 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SSR1P43307 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SSR1P43307 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SSR1P43307 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SSR1P43307 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SSR1P43307 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC18.66■□□□□ 0.58
SSR1P43307 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
SSR1P43307 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.66■□□□□ 0.58
SSR1P43307 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
SSR1P43307 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
SSR1P43307 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.66■□□□□ 0.58
SSR1P43307 AL645608.8-201ENST00000606034 2086 ntBASIC18.66■□□□□ 0.58
SSR1P43307 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SSR1P43307 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SSR1P43307 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SSR1P43307 AC112698.1-201ENST00000510299 916 ntBASIC18.66■□□□□ 0.58
SSR1P43307 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.66■□□□□ 0.58
SSR1P43307 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.66■□□□□ 0.58
SSR1P43307 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.66■□□□□ 0.58
SSR1P43307 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.66■□□□□ 0.58
SSR1P43307 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.66■□□□□ 0.58
SSR1P43307 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.66■□□□□ 0.58
SSR1P43307 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.66■□□□□ 0.58
SSR1P43307 GPR32P1-201ENST00000601788 811 ntBASIC18.66■□□□□ 0.58
SSR1P43307 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SSR1P43307 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
SSR1P43307 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SSR1P43307 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SSR1P43307 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SSR1P43307 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SSR1P43307 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC18.66■□□□□ 0.58
SSR1P43307 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SSR1P43307 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SSR1P43307 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SSR1P43307 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SSR1P43307 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms