Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
PDE6BP35913 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PDE6BP35913 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PDE6BP35913 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PDE6BP35913 POR-209ENST00000439269 1858 ntTSL 2 BASIC21.45■■□□□ 1.02
PDE6BP35913 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PDE6BP35913 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
PDE6BP35913 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PDE6BP35913 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
PDE6BP35913 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC21.44■■□□□ 1.02
PDE6BP35913 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
PDE6BP35913 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC21.44■■□□□ 1.02
PDE6BP35913 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PDE6BP35913 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
PDE6BP35913 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PDE6BP35913 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
PDE6BP35913 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC21.44■■□□□ 1.02
PDE6BP35913 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PDE6BP35913 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PDE6BP35913 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PDE6BP35913 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC21.44■■□□□ 1.02
PDE6BP35913 AC087163.2-201ENST00000457299 853 ntBASIC21.44■■□□□ 1.02
PDE6BP35913 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC21.44■■□□□ 1.02
PDE6BP35913 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC21.44■■□□□ 1.02
PDE6BP35913 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
PDE6BP35913 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC21.44■■□□□ 1.02
PDE6BP35913 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC21.44■■□□□ 1.02
PDE6BP35913 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
PDE6BP35913 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC21.44■■□□□ 1.02
PDE6BP35913 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PDE6BP35913 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
PDE6BP35913 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PDE6BP35913 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PDE6BP35913 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PDE6BP35913 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
PDE6BP35913 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PDE6BP35913 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PDE6BP35913 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PDE6BP35913 TFAMP1-201ENST00000412727 736 ntBASIC21.43■■□□□ 1.02
PDE6BP35913 KRT18P32-201ENST00000424695 1287 ntBASIC21.43■■□□□ 1.02
PDE6BP35913 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PDE6BP35913 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC21.43■■□□□ 1.02
PDE6BP35913 AC087641.1-201ENST00000557561 1021 ntBASIC21.43■■□□□ 1.02
PDE6BP35913 AP001059.3-201ENST00000619053 235 ntBASIC21.43■■□□□ 1.02
PDE6BP35913 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PDE6BP35913 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC21.43■■□□□ 1.02
PDE6BP35913 TUBB3P1-201ENST00000405796 1332 ntBASIC21.43■■□□□ 1.02
PDE6BP35913 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PDE6BP35913 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC21.43■■□□□ 1.02
PDE6BP35913 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PDE6BP35913 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PDE6BP35913 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC21.43■■□□□ 1.02
PDE6BP35913 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PDE6BP35913 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC21.43■■□□□ 1.02
PDE6BP35913 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
PDE6BP35913 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC21.43■■□□□ 1.02
PDE6BP35913 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PDE6BP35913 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC21.43■■□□□ 1.02
PDE6BP35913 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PDE6BP35913 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC21.43■■□□□ 1.02
PDE6BP35913 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PDE6BP35913 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PDE6BP35913 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC21.42■■□□□ 1.02
PDE6BP35913 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
PDE6BP35913 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PDE6BP35913 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PDE6BP35913 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PDE6BP35913 RPL30-202ENST00000396070 440 ntTSL 2 BASIC21.42■■□□□ 1.02
PDE6BP35913 METTL26-204ENST00000397665 558 ntTSL 2 BASIC21.42■■□□□ 1.02
PDE6BP35913 MIR943-201ENST00000401286 94 ntBASIC21.42■■□□□ 1.02
PDE6BP35913 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC21.42■■□□□ 1.02
PDE6BP35913 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PDE6BP35913 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC21.42■■□□□ 1.02
PDE6BP35913 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC21.42■■□□□ 1.02
PDE6BP35913 TERF1P3-201ENST00000505638 1227 ntBASIC21.42■■□□□ 1.02
PDE6BP35913 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC21.42■■□□□ 1.02
PDE6BP35913 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC21.42■■□□□ 1.02
PDE6BP35913 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC21.42■■□□□ 1.02
PDE6BP35913 NAA60-208ENST00000570819 833 ntTSL 2 BASIC21.42■■□□□ 1.02
PDE6BP35913 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC21.42■■□□□ 1.02
PDE6BP35913 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PDE6BP35913 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PDE6BP35913 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PDE6BP35913 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PDE6BP35913 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PDE6BP35913 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PDE6BP35913 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PDE6BP35913 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC21.41■■□□□ 1.02
PDE6BP35913 CROCCP3-202ENST00000420820 1947 ntBASIC21.41■■□□□ 1.02
PDE6BP35913 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PDE6BP35913 AL135999.2-201ENST00000622438 1686 ntBASIC21.41■■□□□ 1.02
PDE6BP35913 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PDE6BP35913 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC21.41■■□□□ 1.02
PDE6BP35913 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PDE6BP35913 AC236430.1-201ENST00000402231 743 ntBASIC21.41■■□□□ 1.02
PDE6BP35913 OARD1-208ENST00000469104 704 ntTSL 2 BASIC21.41■■□□□ 1.02
PDE6BP35913 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC21.41■■□□□ 1.02
PDE6BP35913 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC21.41■■□□□ 1.02
PDE6BP35913 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC21.41■■□□□ 1.02
PDE6BP35913 POLD4-211ENST00000539074 714 ntTSL 3 BASIC21.41■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms