Protein–RNA interactions for Protein: P32246

CCR1, C-C chemokine receptor type 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR1P32246 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
CCR1P32246 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
CCR1P32246 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCR1P32246 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCR1P32246 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCR1P32246 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCR1P32246 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCR1P32246 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.15■□□□□ 0.5
CCR1P32246 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CCR1P32246 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
CCR1P32246 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
CCR1P32246 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CCR1P32246 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCR1P32246 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCR1P32246 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCR1P32246 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.14■□□□□ 0.49
CCR1P32246 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
CCR1P32246 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CCR1P32246 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
CCR1P32246 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.14■□□□□ 0.49
CCR1P32246 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCR1P32246 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCR1P32246 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCR1P32246 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CCR1P32246 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCR1P32246 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.14■□□□□ 0.49
CCR1P32246 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CCR1P32246 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
CCR1P32246 SIGLEC30P-201ENST00000455569 941 ntBASIC18.14■□□□□ 0.49
CCR1P32246 NKAPP1-205ENST00000585790 367 ntBASIC18.14■□□□□ 0.49
CCR1P32246 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.14■□□□□ 0.49
CCR1P32246 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.14■□□□□ 0.49
CCR1P32246 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCR1P32246 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CCR1P32246 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCR1P32246 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.14■□□□□ 0.49
CCR1P32246 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.14■□□□□ 0.49
CCR1P32246 LYSMD4-203ENST00000378904 2122 ntBASIC18.14■□□□□ 0.49
CCR1P32246 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCR1P32246 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CCR1P32246 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.14■□□□□ 0.49
CCR1P32246 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CCR1P32246 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCR1P32246 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC18.14■□□□□ 0.49
CCR1P32246 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCR1P32246 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CCR1P32246 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCR1P32246 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.13■□□□□ 0.49
CCR1P32246 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCR1P32246 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCR1P32246 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.13■□□□□ 0.49
CCR1P32246 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CCR1P32246 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CCR1P32246 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.13■□□□□ 0.49
CCR1P32246 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CCR1P32246 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCR1P32246 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CCR1P32246 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18.13■□□□□ 0.49
CCR1P32246 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCR1P32246 SART3-203ENST00000546611 1184 ntBASIC18.13■□□□□ 0.49
CCR1P32246 AL160237.2-201ENST00000556165 472 ntBASIC18.13■□□□□ 0.49
CCR1P32246 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.13■□□□□ 0.49
CCR1P32246 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCR1P32246 AL121894.2-201ENST00000602977 491 ntBASIC18.13■□□□□ 0.49
CCR1P32246 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCR1P32246 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.13■□□□□ 0.49
CCR1P32246 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCR1P32246 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCR1P32246 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
CCR1P32246 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.13■□□□□ 0.49
CCR1P32246 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC18.13■□□□□ 0.49
CCR1P32246 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCR1P32246 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.13■□□□□ 0.49
CCR1P32246 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.13■□□□□ 0.49
CCR1P32246 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CCR1P32246 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CCR1P32246 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCR1P32246 AC005332.8-201ENST00000622750 2735 ntBASIC18.13■□□□□ 0.49
CCR1P32246 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCR1P32246 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.13■□□□□ 0.49
CCR1P32246 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCR1P32246 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCR1P32246 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCR1P32246 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCR1P32246 AC046185.3-201ENST00000623228 1824 ntBASIC18.12■□□□□ 0.49
CCR1P32246 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCR1P32246 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
CCR1P32246 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
CCR1P32246 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.12■□□□□ 0.49
CCR1P32246 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCR1P32246 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CCR1P32246 PRYP5-201ENST00000451909 266 ntBASIC18.12■□□□□ 0.49
CCR1P32246 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CCR1P32246 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.12■□□□□ 0.49
CCR1P32246 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCR1P32246 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.12■□□□□ 0.49
CCR1P32246 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCR1P32246 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.12■□□□□ 0.49
CCR1P32246 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CCR1P32246 AC104692.2-201ENST00000603054 253 ntBASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms