Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TNFSF4P23510 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC15.03■□□□□ -0
TNFSF4P23510 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TNFSF4P23510 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TNFSF4P23510 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC15.02■□□□□ -0
TNFSF4P23510 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TNFSF4P23510 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
TNFSF4P23510 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
TNFSF4P23510 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
TNFSF4P23510 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TNFSF4P23510 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC15.02■□□□□ -0
TNFSF4P23510 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TNFSF4P23510 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC15.02■□□□□ -0
TNFSF4P23510 INTS4P1-201ENST00000438455 1935 ntBASIC15.02■□□□□ -0
TNFSF4P23510 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC15.02■□□□□ -0
TNFSF4P23510 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
TNFSF4P23510 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
TNFSF4P23510 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TNFSF4P23510 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TNFSF4P23510 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC15.02■□□□□ -0
TNFSF4P23510 DFFB-203ENST00000341385 572 ntTSL 5 BASIC15.02■□□□□ -0
TNFSF4P23510 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TNFSF4P23510 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC15.02■□□□□ -0
TNFSF4P23510 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC15.02■□□□□ -0
TNFSF4P23510 DUSP5P1-201ENST00000441325 1139 ntBASIC15.02■□□□□ -0
TNFSF4P23510 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC15.02■□□□□ -0
TNFSF4P23510 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC15.02■□□□□ -0
TNFSF4P23510 GZMM-202ENST00000592501 941 ntTSL 3 BASIC15.02■□□□□ -0
TNFSF4P23510 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC15.02■□□□□ -0
TNFSF4P23510 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC15.02■□□□□ -0
TNFSF4P23510 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC15.02□□□□□ -0.01
TNFSF4P23510 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
TNFSF4P23510 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
TNFSF4P23510 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TNFSF4P23510 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC15.02□□□□□ -0.01
TNFSF4P23510 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
TNFSF4P23510 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TNFSF4P23510 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC15.02□□□□□ -0.01
TNFSF4P23510 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TNFSF4P23510 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TNFSF4P23510 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
TNFSF4P23510 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
TNFSF4P23510 AC010460.3-201ENST00000511359 1579 ntBASIC15.02□□□□□ -0.01
TNFSF4P23510 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.02□□□□□ -0.01
TNFSF4P23510 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
TNFSF4P23510 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC15.01□□□□□ -0.01
TNFSF4P23510 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TNFSF4P23510 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TNFSF4P23510 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TNFSF4P23510 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TNFSF4P23510 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC15.01□□□□□ -0.01
TNFSF4P23510 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.01□□□□□ -0.01
TNFSF4P23510 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TNFSF4P23510 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TNFSF4P23510 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TNFSF4P23510 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TNFSF4P23510 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC15.01□□□□□ -0.01
TNFSF4P23510 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.01□□□□□ -0.01
TNFSF4P23510 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TNFSF4P23510 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TNFSF4P23510 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC15.01□□□□□ -0.01
TNFSF4P23510 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TNFSF4P23510 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC15.01□□□□□ -0.01
TNFSF4P23510 FUOM-202ENST00000368551 628 ntTSL 3 BASIC15.01□□□□□ -0.01
TNFSF4P23510 MYCLP1-201ENST00000372451 1075 ntBASIC15.01□□□□□ -0.01
TNFSF4P23510 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TNFSF4P23510 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC15.01□□□□□ -0.01
TNFSF4P23510 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TNFSF4P23510 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC15.01□□□□□ -0.01
TNFSF4P23510 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
TNFSF4P23510 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC15.01□□□□□ -0.01
TNFSF4P23510 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC15.01□□□□□ -0.01
TNFSF4P23510 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC15.01□□□□□ -0.01
TNFSF4P23510 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TNFSF4P23510 IFNL4P1-201ENST00000607083 540 ntBASIC15.01□□□□□ -0.01
TNFSF4P23510 AL732292.2-201ENST00000609649 430 ntBASIC15.01□□□□□ -0.01
TNFSF4P23510 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
TNFSF4P23510 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
TNFSF4P23510 PC-208ENST00000529047 1607 ntTSL 3 BASIC15.01□□□□□ -0.01
TNFSF4P23510 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
TNFSF4P23510 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TNFSF4P23510 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC15.01□□□□□ -0.01
TNFSF4P23510 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
TNFSF4P23510 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
TNFSF4P23510 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC15.01□□□□□ -0.01
TNFSF4P23510 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC15.01□□□□□ -0.01
TNFSF4P23510 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC15.01□□□□□ -0.01
TNFSF4P23510 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TNFSF4P23510 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TNFSF4P23510 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TNFSF4P23510 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TNFSF4P23510 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TNFSF4P23510 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TNFSF4P23510 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC15.01□□□□□ -0.01
TNFSF4P23510 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TNFSF4P23510 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
TNFSF4P23510 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC15□□□□□ -0.01
TNFSF4P23510 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
TNFSF4P23510 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
TNFSF4P23510 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms