Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RFX1P22670 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RFX1P22670 AC233702.3-201ENST00000578656 1387 ntBASIC19.1■□□□□ 0.65
RFX1P22670 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RFX1P22670 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RFX1P22670 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC19.1■□□□□ 0.65
RFX1P22670 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RFX1P22670 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RFX1P22670 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
RFX1P22670 AC093909.1-201ENST00000504731 1122 ntBASIC19.1■□□□□ 0.65
RFX1P22670 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RFX1P22670 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC19.1■□□□□ 0.65
RFX1P22670 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC19.1■□□□□ 0.65
RFX1P22670 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC19.1■□□□□ 0.65
RFX1P22670 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC19.1■□□□□ 0.65
RFX1P22670 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC19.1■□□□□ 0.65
RFX1P22670 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC19.1■□□□□ 0.65
RFX1P22670 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC19.1■□□□□ 0.65
RFX1P22670 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC19.1■□□□□ 0.65
RFX1P22670 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC19.1■□□□□ 0.65
RFX1P22670 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RFX1P22670 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC19.1■□□□□ 0.65
RFX1P22670 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC19.1■□□□□ 0.65
RFX1P22670 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
RFX1P22670 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.1■□□□□ 0.65
RFX1P22670 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RFX1P22670 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RFX1P22670 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RFX1P22670 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RFX1P22670 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC19.09■□□□□ 0.65
RFX1P22670 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC19.09■□□□□ 0.65
RFX1P22670 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RFX1P22670 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RFX1P22670 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
RFX1P22670 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC19.09■□□□□ 0.65
RFX1P22670 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RFX1P22670 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RFX1P22670 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RFX1P22670 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC19.09■□□□□ 0.65
RFX1P22670 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC19.09■□□□□ 0.65
RFX1P22670 MOK-208ENST00000519058 917 ntTSL 2 BASIC19.09■□□□□ 0.65
RFX1P22670 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC19.09■□□□□ 0.65
RFX1P22670 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC19.09■□□□□ 0.65
RFX1P22670 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RFX1P22670 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RFX1P22670 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RFX1P22670 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RFX1P22670 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RFX1P22670 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
RFX1P22670 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RFX1P22670 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RFX1P22670 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RFX1P22670 AC141586.5-201ENST00000624546 2050 ntBASIC19.09■□□□□ 0.65
RFX1P22670 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RFX1P22670 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
RFX1P22670 IL9RP2-201ENST00000423948 1312 ntBASIC19.08■□□□□ 0.65
RFX1P22670 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
RFX1P22670 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
RFX1P22670 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RFX1P22670 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RFX1P22670 TLE1-202ENST00000376484 666 ntTSL 3 BASIC19.08■□□□□ 0.64
RFX1P22670 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
RFX1P22670 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
RFX1P22670 GUSBP12-201ENST00000513727 720 ntBASIC19.08■□□□□ 0.64
RFX1P22670 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC19.08■□□□□ 0.64
RFX1P22670 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
RFX1P22670 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC19.08■□□□□ 0.64
RFX1P22670 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC19.08■□□□□ 0.64
RFX1P22670 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC19.08■□□□□ 0.64
RFX1P22670 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC19.08■□□□□ 0.64
RFX1P22670 AL773604.1-201ENST00000617417 272 ntBASIC19.08■□□□□ 0.64
RFX1P22670 NME4-212ENST00000621774 904 ntTSL 3 BASIC19.08■□□□□ 0.64
RFX1P22670 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC19.08■□□□□ 0.64
RFX1P22670 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RFX1P22670 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RFX1P22670 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RFX1P22670 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC19.08■□□□□ 0.64
RFX1P22670 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RFX1P22670 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC19.08■□□□□ 0.64
RFX1P22670 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC19.08■□□□□ 0.64
RFX1P22670 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
RFX1P22670 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RFX1P22670 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC19.08■□□□□ 0.64
RFX1P22670 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
RFX1P22670 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RFX1P22670 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
RFX1P22670 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RFX1P22670 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RFX1P22670 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
RFX1P22670 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC19.07■□□□□ 0.64
RFX1P22670 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
RFX1P22670 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RFX1P22670 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC19.07■□□□□ 0.64
RFX1P22670 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
RFX1P22670 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RFX1P22670 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RFX1P22670 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RFX1P22670 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
RFX1P22670 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RFX1P22670 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms