Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-DPA1P20036 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
HLA-DPA1P20036 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-DPA1P20036 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-DPA1P20036 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-DPA1P20036 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
HLA-DPA1P20036 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.71■□□□□ 0.43
HLA-DPA1P20036 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-DPA1P20036 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-DPA1P20036 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.71■□□□□ 0.43
HLA-DPA1P20036 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-DPA1P20036 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.71■□□□□ 0.43
HLA-DPA1P20036 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-DPA1P20036 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-DPA1P20036 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-DPA1P20036 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.7■□□□□ 0.42
HLA-DPA1P20036 INTS4P1-201ENST00000438455 1935 ntBASIC17.7■□□□□ 0.42
HLA-DPA1P20036 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.7■□□□□ 0.42
HLA-DPA1P20036 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.7■□□□□ 0.42
HLA-DPA1P20036 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DPA1P20036 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DPA1P20036 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.7■□□□□ 0.42
HLA-DPA1P20036 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.7■□□□□ 0.42
HLA-DPA1P20036 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DPA1P20036 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
HLA-DPA1P20036 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DPA1P20036 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DPA1P20036 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DPA1P20036 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DPA1P20036 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DPA1P20036 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.7■□□□□ 0.42
HLA-DPA1P20036 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DPA1P20036 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DPA1P20036 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.7■□□□□ 0.42
HLA-DPA1P20036 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.7■□□□□ 0.42
HLA-DPA1P20036 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.7■□□□□ 0.42
HLA-DPA1P20036 AC099336.1-202ENST00000602961 463 ntBASIC17.7■□□□□ 0.42
HLA-DPA1P20036 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DPA1P20036 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DPA1P20036 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
HLA-DPA1P20036 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DPA1P20036 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
HLA-DPA1P20036 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DPA1P20036 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.7■□□□□ 0.42
HLA-DPA1P20036 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
HLA-DPA1P20036 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.69■□□□□ 0.42
HLA-DPA1P20036 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HLA-DPA1P20036 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
HLA-DPA1P20036 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.69■□□□□ 0.42
HLA-DPA1P20036 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HLA-DPA1P20036 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
HLA-DPA1P20036 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.69■□□□□ 0.42
HLA-DPA1P20036 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.69■□□□□ 0.42
HLA-DPA1P20036 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.69■□□□□ 0.42
HLA-DPA1P20036 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HLA-DPA1P20036 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HLA-DPA1P20036 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
HLA-DPA1P20036 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
HLA-DPA1P20036 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HLA-DPA1P20036 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
HLA-DPA1P20036 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HLA-DPA1P20036 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HLA-DPA1P20036 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.69■□□□□ 0.42
HLA-DPA1P20036 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.69■□□□□ 0.42
HLA-DPA1P20036 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
HLA-DPA1P20036 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.69■□□□□ 0.42
HLA-DPA1P20036 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
HLA-DPA1P20036 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.69■□□□□ 0.42
HLA-DPA1P20036 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.69■□□□□ 0.42
HLA-DPA1P20036 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HLA-DPA1P20036 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HLA-DPA1P20036 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.69■□□□□ 0.42
HLA-DPA1P20036 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.69■□□□□ 0.42
HLA-DPA1P20036 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
HLA-DPA1P20036 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HLA-DPA1P20036 AL353593.2-201ENST00000602529 1483 ntBASIC17.69■□□□□ 0.42
HLA-DPA1P20036 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
HLA-DPA1P20036 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HLA-DPA1P20036 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HLA-DPA1P20036 PP12613-201ENST00000424958 2230 ntBASIC17.68■□□□□ 0.42
HLA-DPA1P20036 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
HLA-DPA1P20036 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HLA-DPA1P20036 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HLA-DPA1P20036 FER1L4-210ENST00000615531 5998 ntBASIC17.68■□□□□ 0.42
HLA-DPA1P20036 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
HLA-DPA1P20036 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
HLA-DPA1P20036 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.68■□□□□ 0.42
HLA-DPA1P20036 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.68■□□□□ 0.42
HLA-DPA1P20036 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HLA-DPA1P20036 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HLA-DPA1P20036 RCN1P2-201ENST00000398357 915 ntBASIC17.68■□□□□ 0.42
HLA-DPA1P20036 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HLA-DPA1P20036 HCG4P8-203ENST00000443049 980 ntBASIC17.68■□□□□ 0.42
HLA-DPA1P20036 KRT8P10-201ENST00000450021 1447 ntBASIC17.68■□□□□ 0.42
HLA-DPA1P20036 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.68■□□□□ 0.42
HLA-DPA1P20036 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.68■□□□□ 0.42
HLA-DPA1P20036 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.68■□□□□ 0.42
HLA-DPA1P20036 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.68■□□□□ 0.42
HLA-DPA1P20036 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HLA-DPA1P20036 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms