Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CD58P19256 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CD58P19256 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
CD58P19256 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CD58P19256 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CD58P19256 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CD58P19256 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CD58P19256 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CD58P19256 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.82■□□□□ 0.6
CD58P19256 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
CD58P19256 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CD58P19256 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CD58P19256 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CD58P19256 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CD58P19256 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CD58P19256 TSPY19P-201ENST00000418461 509 ntBASIC18.82■□□□□ 0.6
CD58P19256 TSPY18P-201ENST00000441642 509 ntBASIC18.82■□□□□ 0.6
CD58P19256 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.82■□□□□ 0.6
CD58P19256 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CD58P19256 AC091304.2-201ENST00000564639 760 ntBASIC18.82■□□□□ 0.6
CD58P19256 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.82■□□□□ 0.6
CD58P19256 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.82■□□□□ 0.6
CD58P19256 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CD58P19256 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.82■□□□□ 0.6
CD58P19256 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CD58P19256 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CD58P19256 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CD58P19256 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CD58P19256 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CD58P19256 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CD58P19256 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.82■□□□□ 0.6
CD58P19256 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CD58P19256 KRT8P10-201ENST00000450021 1447 ntBASIC18.82■□□□□ 0.6
CD58P19256 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CD58P19256 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CD58P19256 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CD58P19256 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.81■□□□□ 0.6
CD58P19256 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CD58P19256 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CD58P19256 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.81■□□□□ 0.6
CD58P19256 AL049757.1-201ENST00000616842 1596 ntBASIC18.81■□□□□ 0.6
CD58P19256 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CD58P19256 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CD58P19256 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CD58P19256 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CD58P19256 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.81■□□□□ 0.6
CD58P19256 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
CD58P19256 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CD58P19256 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CD58P19256 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CD58P19256 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CD58P19256 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CD58P19256 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CD58P19256 AC005104.2-201ENST00000427818 678 ntBASIC18.81■□□□□ 0.6
CD58P19256 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CD58P19256 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CD58P19256 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CD58P19256 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.81■□□□□ 0.6
CD58P19256 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CD58P19256 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CD58P19256 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CD58P19256 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CD58P19256 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CD58P19256 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.81■□□□□ 0.6
CD58P19256 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CD58P19256 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CD58P19256 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.8■□□□□ 0.6
CD58P19256 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CD58P19256 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CD58P19256 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
CD58P19256 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CD58P19256 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.8■□□□□ 0.6
CD58P19256 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
CD58P19256 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CD58P19256 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.8■□□□□ 0.6
CD58P19256 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CD58P19256 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.8■□□□□ 0.6
CD58P19256 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.8■□□□□ 0.6
CD58P19256 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CD58P19256 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CD58P19256 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.8■□□□□ 0.6
CD58P19256 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.8■□□□□ 0.6
CD58P19256 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CD58P19256 AC103564.2-201ENST00000432853 1299 ntBASIC18.8■□□□□ 0.6
CD58P19256 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.8■□□□□ 0.6
CD58P19256 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.8■□□□□ 0.6
CD58P19256 AC132008.2-207ENST00000454517 770 ntBASIC18.8■□□□□ 0.6
CD58P19256 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.8■□□□□ 0.6
CD58P19256 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.8■□□□□ 0.6
CD58P19256 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.8■□□□□ 0.6
CD58P19256 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.8■□□□□ 0.6
CD58P19256 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.8■□□□□ 0.6
CD58P19256 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.8■□□□□ 0.6
CD58P19256 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.8■□□□□ 0.6
CD58P19256 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.8■□□□□ 0.6
CD58P19256 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CD58P19256 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CD58P19256 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.8■□□□□ 0.6
CD58P19256 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
CD58P19256 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms