Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
VCLP18206 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
VCLP18206 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
VCLP18206 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
VCLP18206 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VCLP18206 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
VCLP18206 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
VCLP18206 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
VCLP18206 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
VCLP18206 CBFB-203ENST00000561924 584 ntTSL 5 BASIC17.66■□□□□ 0.42
VCLP18206 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.66■□□□□ 0.42
VCLP18206 AC074051.2-201ENST00000565115 352 ntBASIC17.66■□□□□ 0.42
VCLP18206 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.66■□□□□ 0.42
VCLP18206 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
VCLP18206 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.66■□□□□ 0.42
VCLP18206 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.66■□□□□ 0.42
VCLP18206 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
VCLP18206 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VCLP18206 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
VCLP18206 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
VCLP18206 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VCLP18206 NKILA-202ENST00000614771 2598 ntBASIC17.66■□□□□ 0.42
VCLP18206 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.66■□□□□ 0.42
VCLP18206 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.66■□□□□ 0.42
VCLP18206 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
VCLP18206 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
VCLP18206 AC011676.5-201ENST00000624864 2660 ntBASIC17.65■□□□□ 0.42
VCLP18206 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VCLP18206 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
VCLP18206 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VCLP18206 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VCLP18206 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
VCLP18206 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
VCLP18206 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
VCLP18206 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
VCLP18206 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
VCLP18206 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
VCLP18206 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
VCLP18206 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VCLP18206 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
VCLP18206 KRT17P6-201ENST00000453795 1220 ntBASIC17.65■□□□□ 0.42
VCLP18206 MINOS1P3-201ENST00000457048 203 ntBASIC17.65■□□□□ 0.42
VCLP18206 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.65■□□□□ 0.42
VCLP18206 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
VCLP18206 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
VCLP18206 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.65■□□□□ 0.42
VCLP18206 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
VCLP18206 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
VCLP18206 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.65■□□□□ 0.42
VCLP18206 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
VCLP18206 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
VCLP18206 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.65■□□□□ 0.42
VCLP18206 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.65■□□□□ 0.42
VCLP18206 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
VCLP18206 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VCLP18206 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
VCLP18206 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VCLP18206 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.65■□□□□ 0.42
VCLP18206 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
VCLP18206 AC022211.2-201ENST00000585075 2527 ntBASIC17.65■□□□□ 0.42
VCLP18206 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
VCLP18206 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.65■□□□□ 0.42
VCLP18206 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.65■□□□□ 0.42
VCLP18206 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.65■□□□□ 0.42
VCLP18206 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VCLP18206 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
VCLP18206 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
VCLP18206 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.65■□□□□ 0.42
VCLP18206 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VCLP18206 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
VCLP18206 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
VCLP18206 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.64■□□□□ 0.42
VCLP18206 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
VCLP18206 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VCLP18206 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
VCLP18206 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
VCLP18206 AC011270.2-201ENST00000624293 2550 ntBASIC17.64■□□□□ 0.41
VCLP18206 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
VCLP18206 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VCLP18206 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VCLP18206 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
VCLP18206 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
VCLP18206 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
VCLP18206 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
VCLP18206 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.64■□□□□ 0.41
VCLP18206 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC17.64■□□□□ 0.41
VCLP18206 NUS1P1-201ENST00000446295 882 ntBASIC17.64■□□□□ 0.41
VCLP18206 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
VCLP18206 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.64■□□□□ 0.41
VCLP18206 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.64■□□□□ 0.41
VCLP18206 CLEC4GP1-201ENST00000596555 870 ntBASIC17.64■□□□□ 0.41
VCLP18206 AL353801.3-201ENST00000609898 542 ntBASIC17.64■□□□□ 0.41
VCLP18206 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
VCLP18206 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.64■□□□□ 0.41
VCLP18206 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.64■□□□□ 0.41
VCLP18206 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VCLP18206 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
VCLP18206 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.64■□□□□ 0.41
VCLP18206 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.64■□□□□ 0.41
VCLP18206 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms