Protein–RNA interactions for Protein: P16615

ATP2A2, Sarcoplasmic/endoplasmic reticulum calcium ATPase 2, humanhuman

Known RBP Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2P16615 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATP2A2P16615 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ATP2A2P16615 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATP2A2P16615 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATP2A2P16615 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ATP2A2P16615 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATP2A2P16615 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.36■□□□□ 0.69
ATP2A2P16615 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATP2A2P16615 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATP2A2P16615 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATP2A2P16615 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATP2A2P16615 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATP2A2P16615 MED29-202ENST00000594368 1471 ntTSL 2 BASIC19.36■□□□□ 0.69
ATP2A2P16615 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATP2A2P16615 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATP2A2P16615 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATP2A2P16615 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ATP2A2P16615 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC19.36■□□□□ 0.69
ATP2A2P16615 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
ATP2A2P16615 AC073621.1-201ENST00000392730 636 ntBASIC19.36■□□□□ 0.69
ATP2A2P16615 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC19.36■□□□□ 0.69
ATP2A2P16615 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC19.36■□□□□ 0.69
ATP2A2P16615 FAM8A3P-201ENST00000427218 844 ntBASIC19.36■□□□□ 0.69
ATP2A2P16615 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC19.36■□□□□ 0.69
ATP2A2P16615 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ATP2A2P16615 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATP2A2P16615 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ATP2A2P16615 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC19.36■□□□□ 0.69
ATP2A2P16615 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
ATP2A2P16615 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.36■□□□□ 0.69
ATP2A2P16615 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.36■□□□□ 0.69
ATP2A2P16615 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC19.36■□□□□ 0.69
ATP2A2P16615 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATP2A2P16615 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATP2A2P16615 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATP2A2P16615 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.35■□□□□ 0.69
ATP2A2P16615 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.35■□□□□ 0.69
ATP2A2P16615 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC19.35■□□□□ 0.69
ATP2A2P16615 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.35■□□□□ 0.69
ATP2A2P16615 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.35■□□□□ 0.69
ATP2A2P16615 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
ATP2A2P16615 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
ATP2A2P16615 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC19.35■□□□□ 0.69
ATP2A2P16615 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ATP2A2P16615 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC19.35■□□□□ 0.69
ATP2A2P16615 METTL26-205ENST00000397666 726 ntTSL 2 BASIC19.35■□□□□ 0.69
ATP2A2P16615 CNN2P11-201ENST00000429351 262 ntBASIC19.35■□□□□ 0.69
ATP2A2P16615 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC19.35■□□□□ 0.69
ATP2A2P16615 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC19.35■□□□□ 0.69
ATP2A2P16615 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ATP2A2P16615 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC19.35■□□□□ 0.69
ATP2A2P16615 TCAP-202ENST00000578283 583 ntTSL 5 BASIC19.35■□□□□ 0.69
ATP2A2P16615 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC19.35■□□□□ 0.69
ATP2A2P16615 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC19.35■□□□□ 0.69
ATP2A2P16615 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ATP2A2P16615 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
ATP2A2P16615 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ATP2A2P16615 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC19.35■□□□□ 0.69
ATP2A2P16615 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ATP2A2P16615 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC19.35■□□□□ 0.69
ATP2A2P16615 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC19.35■□□□□ 0.69
ATP2A2P16615 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
ATP2A2P16615 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.35■□□□□ 0.69
ATP2A2P16615 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ATP2A2P16615 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.35■□□□□ 0.69
ATP2A2P16615 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.34■□□□□ 0.69
ATP2A2P16615 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ATP2A2P16615 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
ATP2A2P16615 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ATP2A2P16615 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ATP2A2P16615 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ATP2A2P16615 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ATP2A2P16615 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ATP2A2P16615 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ATP2A2P16615 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC19.34■□□□□ 0.69
ATP2A2P16615 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ATP2A2P16615 AP002472.1-201ENST00000577490 586 ntBASIC19.34■□□□□ 0.69
ATP2A2P16615 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
ATP2A2P16615 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
ATP2A2P16615 ORC5-208ENST00000626700 344 ntTSL 3 BASIC19.34■□□□□ 0.69
ATP2A2P16615 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC19.34■□□□□ 0.69
ATP2A2P16615 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC19.34■□□□□ 0.69
ATP2A2P16615 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC19.34■□□□□ 0.69
ATP2A2P16615 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ATP2A2P16615 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ATP2A2P16615 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ATP2A2P16615 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.34■□□□□ 0.69
ATP2A2P16615 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.34■□□□□ 0.69
ATP2A2P16615 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ATP2A2P16615 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC19.34■□□□□ 0.69
ATP2A2P16615 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ATP2A2P16615 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
ATP2A2P16615 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
ATP2A2P16615 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ATP2A2P16615 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.33■□□□□ 0.69
ATP2A2P16615 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
ATP2A2P16615 LINC01126-201ENST00000623515 1646 ntBASIC19.33■□□□□ 0.69
ATP2A2P16615 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
ATP2A2P16615 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
ATP2A2P16615 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms