Protein–RNA interactions for Protein: P15056

BRAF, Serine/threonine-protein kinase B-raf, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP15056 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
BRAFP15056 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
BRAFP15056 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
BRAFP15056 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
BRAFP15056 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
BRAFP15056 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
BRAFP15056 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
BRAFP15056 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
BRAFP15056 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
BRAFP15056 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
BRAFP15056 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
BRAFP15056 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
BRAFP15056 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
BRAFP15056 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
BRAFP15056 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
BRAFP15056 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
BRAFP15056 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
BRAFP15056 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.05■□□□□ 0.48
BRAFP15056 HLA-F-220ENST00000434407 884 ntBASIC18.05■□□□□ 0.48
BRAFP15056 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.05■□□□□ 0.48
BRAFP15056 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC18.05■□□□□ 0.48
BRAFP15056 MIR3180-4-201ENST00000582223 153 ntBASIC18.05■□□□□ 0.48
BRAFP15056 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
BRAFP15056 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
BRAFP15056 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC18.05■□□□□ 0.48
BRAFP15056 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
BRAFP15056 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
BRAFP15056 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
BRAFP15056 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
BRAFP15056 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
BRAFP15056 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
BRAFP15056 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
BRAFP15056 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
BRAFP15056 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
BRAFP15056 AL391807.1-203ENST00000604392 2365 ntBASIC18.04■□□□□ 0.48
BRAFP15056 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.04■□□□□ 0.48
BRAFP15056 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
BRAFP15056 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.04■□□□□ 0.48
BRAFP15056 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.04■□□□□ 0.48
BRAFP15056 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.04■□□□□ 0.48
BRAFP15056 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
BRAFP15056 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC18.04■□□□□ 0.48
BRAFP15056 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
BRAFP15056 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
BRAFP15056 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC18.04■□□□□ 0.48
BRAFP15056 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
BRAFP15056 AL024508.2-201ENST00000607749 1894 ntBASIC18.04■□□□□ 0.48
BRAFP15056 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.04■□□□□ 0.48
BRAFP15056 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
BRAFP15056 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
BRAFP15056 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
BRAFP15056 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
BRAFP15056 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
BRAFP15056 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.04■□□□□ 0.48
BRAFP15056 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
BRAFP15056 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
BRAFP15056 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.04■□□□□ 0.48
BRAFP15056 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.04■□□□□ 0.48
BRAFP15056 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
BRAFP15056 AC091076.1-201ENST00000610741 619 ntBASIC18.04■□□□□ 0.48
BRAFP15056 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
BRAFP15056 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.04■□□□□ 0.48
BRAFP15056 AC116407.4-201ENST00000623319 1061 ntBASIC18.04■□□□□ 0.48
BRAFP15056 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
BRAFP15056 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.04■□□□□ 0.48
BRAFP15056 AP000550.4-202ENST00000639755 178 ntBASIC18.04■□□□□ 0.48
BRAFP15056 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
BRAFP15056 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
BRAFP15056 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.04■□□□□ 0.48
BRAFP15056 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.04■□□□□ 0.48
BRAFP15056 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
BRAFP15056 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
BRAFP15056 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
BRAFP15056 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
BRAFP15056 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
BRAFP15056 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
BRAFP15056 CROCCP1-201ENST00000426910 5675 ntBASIC18.03■□□□□ 0.48
BRAFP15056 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
BRAFP15056 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
BRAFP15056 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC18.03■□□□□ 0.48
BRAFP15056 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.03■□□□□ 0.48
BRAFP15056 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
BRAFP15056 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.03■□□□□ 0.48
BRAFP15056 PCDHB19P-201ENST00000570871 2371 ntBASIC18.03■□□□□ 0.48
BRAFP15056 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
BRAFP15056 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC18.03■□□□□ 0.48
BRAFP15056 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
BRAFP15056 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
BRAFP15056 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
BRAFP15056 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
BRAFP15056 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.03■□□□□ 0.48
BRAFP15056 HLA-J-201ENST00000462773 1622 ntBASIC18.03■□□□□ 0.48
BRAFP15056 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
BRAFP15056 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
BRAFP15056 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
BRAFP15056 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
BRAFP15056 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
BRAFP15056 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
BRAFP15056 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
BRAFP15056 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms