Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VTNP04004 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
VTNP04004 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC19.17■□□□□ 0.66
VTNP04004 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
VTNP04004 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VTNP04004 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
VTNP04004 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VTNP04004 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.17■□□□□ 0.66
VTNP04004 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
VTNP04004 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC19.17■□□□□ 0.66
VTNP04004 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VTNP04004 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC19.17■□□□□ 0.66
VTNP04004 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VTNP04004 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VTNP04004 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
VTNP04004 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
VTNP04004 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VTNP04004 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
VTNP04004 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VTNP04004 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
VTNP04004 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC19.16■□□□□ 0.66
VTNP04004 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
VTNP04004 PTCHD3P3-201ENST00000403073 906 ntBASIC19.16■□□□□ 0.66
VTNP04004 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC19.16■□□□□ 0.66
VTNP04004 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
VTNP04004 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VTNP04004 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VTNP04004 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.16■□□□□ 0.66
VTNP04004 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC19.16■□□□□ 0.66
VTNP04004 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VTNP04004 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC19.16■□□□□ 0.66
VTNP04004 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VTNP04004 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.16■□□□□ 0.66
VTNP04004 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.15■□□□□ 0.66
VTNP04004 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
VTNP04004 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
VTNP04004 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC19.15■□□□□ 0.66
VTNP04004 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
VTNP04004 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC19.15■□□□□ 0.66
VTNP04004 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC19.15■□□□□ 0.66
VTNP04004 YBX2P1-201ENST00000394192 760 ntBASIC19.15■□□□□ 0.66
VTNP04004 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC19.15■□□□□ 0.66
VTNP04004 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC19.15■□□□□ 0.66
VTNP04004 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC19.15■□□□□ 0.66
VTNP04004 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VTNP04004 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC19.15■□□□□ 0.66
VTNP04004 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VTNP04004 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
VTNP04004 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC19.14■□□□□ 0.66
VTNP04004 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
VTNP04004 AC046185.3-201ENST00000623228 1824 ntBASIC19.14■□□□□ 0.65
VTNP04004 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
VTNP04004 NEFHP1-201ENST00000412845 2629 ntBASIC19.14■□□□□ 0.65
VTNP04004 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC19.14■□□□□ 0.65
VTNP04004 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
VTNP04004 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.14■□□□□ 0.65
VTNP04004 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
VTNP04004 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
VTNP04004 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
VTNP04004 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
VTNP04004 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC19.14■□□□□ 0.65
VTNP04004 NME9-203ENST00000383180 2133 ntTSL 2 BASIC19.14■□□□□ 0.65
VTNP04004 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
VTNP04004 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
VTNP04004 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC19.14■□□□□ 0.65
VTNP04004 CRYGEP-201ENST00000412192 528 ntBASIC19.14■□□□□ 0.65
VTNP04004 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
VTNP04004 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
VTNP04004 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
VTNP04004 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC19.14■□□□□ 0.65
VTNP04004 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
VTNP04004 AC055717.3-201ENST00000622967 595 ntBASIC19.14■□□□□ 0.65
VTNP04004 AL805961.1-202ENST00000641562 540 ntBASIC19.14■□□□□ 0.65
VTNP04004 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
VTNP04004 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
VTNP04004 GPR89P-201ENST00000407924 1495 ntBASIC19.14■□□□□ 0.65
VTNP04004 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
VTNP04004 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC19.14■□□□□ 0.65
VTNP04004 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
VTNP04004 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
VTNP04004 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
VTNP04004 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
VTNP04004 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC19.13■□□□□ 0.65
VTNP04004 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
VTNP04004 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.13■□□□□ 0.65
VTNP04004 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
VTNP04004 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.13■□□□□ 0.65
VTNP04004 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
VTNP04004 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
VTNP04004 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
VTNP04004 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
VTNP04004 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
VTNP04004 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
VTNP04004 METTL26-205ENST00000397666 726 ntTSL 2 BASIC19.13■□□□□ 0.65
VTNP04004 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC19.13■□□□□ 0.65
VTNP04004 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
VTNP04004 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
VTNP04004 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
VTNP04004 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC19.13■□□□□ 0.65
VTNP04004 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms