Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRBV12-3P01733 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TRBV12-3P01733 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC13.55□□□□□ -0.24
TRBV12-3P01733 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC13.55□□□□□ -0.24
TRBV12-3P01733 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRBV12-3P01733 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC13.55□□□□□ -0.24
TRBV12-3P01733 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
TRBV12-3P01733 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC13.55□□□□□ -0.24
TRBV12-3P01733 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TRBV12-3P01733 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRBV12-3P01733 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TRBV12-3P01733 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TRBV12-3P01733 AKR1C7P-201ENST00000305623 895 ntBASIC13.55□□□□□ -0.24
TRBV12-3P01733 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TRBV12-3P01733 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRBV12-3P01733 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRBV12-3P01733 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRBV12-3P01733 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRBV12-3P01733 CD9-202ENST00000382515 1229 ntTSL 5 BASIC13.55□□□□□ -0.24
TRBV12-3P01733 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC13.55□□□□□ -0.24
TRBV12-3P01733 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TRBV12-3P01733 AC103564.2-201ENST00000432853 1299 ntBASIC13.55□□□□□ -0.24
TRBV12-3P01733 RBSN-204ENST00000449050 903 ntTSL 2 BASIC13.55□□□□□ -0.24
TRBV12-3P01733 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC13.55□□□□□ -0.24
TRBV12-3P01733 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
TRBV12-3P01733 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC13.55□□□□□ -0.24
TRBV12-3P01733 IRF5-214ENST00000613821 595 ntTSL 5 BASIC13.55□□□□□ -0.24
TRBV12-3P01733 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
TRBV12-3P01733 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC13.55□□□□□ -0.24
TRBV12-3P01733 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC13.55□□□□□ -0.24
TRBV12-3P01733 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRBV12-3P01733 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
TRBV12-3P01733 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC13.55□□□□□ -0.24
TRBV12-3P01733 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRBV12-3P01733 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRBV12-3P01733 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC13.55□□□□□ -0.24
TRBV12-3P01733 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TRBV12-3P01733 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRBV12-3P01733 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRBV12-3P01733 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC13.55□□□□□ -0.24
TRBV12-3P01733 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC13.55□□□□□ -0.24
TRBV12-3P01733 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV12-3P01733 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV12-3P01733 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
TRBV12-3P01733 FUT8-AS1-201ENST00000621019 1521 ntBASIC13.54□□□□□ -0.24
TRBV12-3P01733 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV12-3P01733 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV12-3P01733 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
TRBV12-3P01733 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
TRBV12-3P01733 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV12-3P01733 LYSMD4-203ENST00000378904 2122 ntBASIC13.54□□□□□ -0.24
TRBV12-3P01733 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV12-3P01733 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV12-3P01733 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC13.54□□□□□ -0.24
TRBV12-3P01733 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV12-3P01733 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC13.54□□□□□ -0.24
TRBV12-3P01733 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV12-3P01733 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
TRBV12-3P01733 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV12-3P01733 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV12-3P01733 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC13.54□□□□□ -0.24
TRBV12-3P01733 AL450487.1-201ENST00000426799 995 ntBASIC13.54□□□□□ -0.24
TRBV12-3P01733 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC13.54□□□□□ -0.24
TRBV12-3P01733 NKTR-203ENST00000442970 646 ntTSL 2 BASIC13.54□□□□□ -0.24
TRBV12-3P01733 ABCD1P5-201ENST00000445663 754 ntBASIC13.54□□□□□ -0.24
TRBV12-3P01733 AC002558.1-201ENST00000488906 803 ntBASIC13.54□□□□□ -0.24
TRBV12-3P01733 IGHV3-52-201ENST00000519770 353 ntBASIC13.54□□□□□ -0.24
TRBV12-3P01733 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC13.54□□□□□ -0.24
TRBV12-3P01733 KRT126P-201ENST00000549467 1181 ntBASIC13.54□□□□□ -0.24
TRBV12-3P01733 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC13.54□□□□□ -0.24
TRBV12-3P01733 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV12-3P01733 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
TRBV12-3P01733 AD001527.2-201ENST00000622994 785 ntBASIC13.54□□□□□ -0.24
TRBV12-3P01733 AC073592.5-201ENST00000624854 528 ntBASIC13.54□□□□□ -0.24
TRBV12-3P01733 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC13.54□□□□□ -0.24
TRBV12-3P01733 AC132938.5-201ENST00000624980 1813 ntBASIC13.54□□□□□ -0.24
TRBV12-3P01733 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
TRBV12-3P01733 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV12-3P01733 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV12-3P01733 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC13.54□□□□□ -0.24
TRBV12-3P01733 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV12-3P01733 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC13.54□□□□□ -0.24
TRBV12-3P01733 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC13.54□□□□□ -0.24
TRBV12-3P01733 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC13.54□□□□□ -0.24
TRBV12-3P01733 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC13.54□□□□□ -0.24
TRBV12-3P01733 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
TRBV12-3P01733 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV12-3P01733 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC13.54□□□□□ -0.24
TRBV12-3P01733 AL353593.2-201ENST00000602529 1483 ntBASIC13.54□□□□□ -0.24
TRBV12-3P01733 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV12-3P01733 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV12-3P01733 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV12-3P01733 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC13.53□□□□□ -0.24
TRBV12-3P01733 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV12-3P01733 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV12-3P01733 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV12-3P01733 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
TRBV12-3P01733 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV12-3P01733 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV12-3P01733 AMT-250ENST00000637682 1823 ntTSL 5 BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms