Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
IFNA1P01562 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
IFNA1P01562 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC13.91□□□□□ -0.18
IFNA1P01562 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
IFNA1P01562 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
IFNA1P01562 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
IFNA1P01562 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
IFNA1P01562 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
IFNA1P01562 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
IFNA1P01562 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
IFNA1P01562 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
IFNA1P01562 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
IFNA1P01562 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC13.9□□□□□ -0.18
IFNA1P01562 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC13.9□□□□□ -0.18
IFNA1P01562 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC13.9□□□□□ -0.18
IFNA1P01562 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
IFNA1P01562 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
IFNA1P01562 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
IFNA1P01562 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
IFNA1P01562 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC13.9□□□□□ -0.18
IFNA1P01562 MCCD1P1-208ENST00000445732 328 ntBASIC13.9□□□□□ -0.18
IFNA1P01562 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC13.9□□□□□ -0.18
IFNA1P01562 OR2A1-AS1-207ENST00000486094 819 ntBASIC13.9□□□□□ -0.18
IFNA1P01562 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC13.9□□□□□ -0.18
IFNA1P01562 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC13.9□□□□□ -0.18
IFNA1P01562 AC009065.1-201ENST00000564055 1225 ntBASIC13.9□□□□□ -0.18
IFNA1P01562 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
IFNA1P01562 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
IFNA1P01562 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
IFNA1P01562 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
IFNA1P01562 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC13.9□□□□□ -0.18
IFNA1P01562 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC13.9□□□□□ -0.18
IFNA1P01562 FUK-207ENST00000571514 3054 ntTSL 2 BASIC13.9□□□□□ -0.18
IFNA1P01562 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
IFNA1P01562 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
IFNA1P01562 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
IFNA1P01562 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
IFNA1P01562 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
IFNA1P01562 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
IFNA1P01562 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
IFNA1P01562 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
IFNA1P01562 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
IFNA1P01562 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
IFNA1P01562 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
IFNA1P01562 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC13.9□□□□□ -0.18
IFNA1P01562 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC13.9□□□□□ -0.18
IFNA1P01562 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
IFNA1P01562 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.19
IFNA1P01562 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
IFNA1P01562 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC13.89□□□□□ -0.19
IFNA1P01562 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
IFNA1P01562 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
IFNA1P01562 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
IFNA1P01562 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
IFNA1P01562 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
IFNA1P01562 OR2I1P-210ENST00000642037 4691 ntBASIC13.89□□□□□ -0.19
IFNA1P01562 AC100803.2-201ENST00000562459 1963 ntBASIC13.89□□□□□ -0.19
IFNA1P01562 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
IFNA1P01562 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
IFNA1P01562 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
IFNA1P01562 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
IFNA1P01562 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
IFNA1P01562 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
IFNA1P01562 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
IFNA1P01562 NBPF21P-201ENST00000425093 1451 ntBASIC13.89□□□□□ -0.19
IFNA1P01562 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC13.89□□□□□ -0.19
IFNA1P01562 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
IFNA1P01562 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC13.89□□□□□ -0.19
IFNA1P01562 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
IFNA1P01562 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC13.89□□□□□ -0.19
IFNA1P01562 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC13.89□□□□□ -0.19
IFNA1P01562 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC13.89□□□□□ -0.19
IFNA1P01562 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC13.89□□□□□ -0.19
IFNA1P01562 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC13.89□□□□□ -0.19
IFNA1P01562 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC13.89□□□□□ -0.19
IFNA1P01562 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
IFNA1P01562 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC13.89□□□□□ -0.19
IFNA1P01562 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC13.89□□□□□ -0.19
IFNA1P01562 MAZ-216ENST00000616501 991 ntTSL 5 BASIC13.89□□□□□ -0.19
IFNA1P01562 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC13.89□□□□□ -0.19
IFNA1P01562 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
IFNA1P01562 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC13.89□□□□□ -0.19
IFNA1P01562 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
IFNA1P01562 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC13.89□□□□□ -0.19
IFNA1P01562 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
IFNA1P01562 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
IFNA1P01562 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
IFNA1P01562 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
IFNA1P01562 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
IFNA1P01562 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC13.89□□□□□ -0.19
IFNA1P01562 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC13.89□□□□□ -0.19
IFNA1P01562 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
IFNA1P01562 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
IFNA1P01562 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
IFNA1P01562 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
IFNA1P01562 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC13.88□□□□□ -0.19
IFNA1P01562 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
IFNA1P01562 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
IFNA1P01562 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
IFNA1P01562 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms