Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CSPG5O95196 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CSPG5O95196 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CSPG5O95196 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CSPG5O95196 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CSPG5O95196 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CSPG5O95196 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CSPG5O95196 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CSPG5O95196 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CSPG5O95196 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CSPG5O95196 AC254562.1-201ENST00000417586 456 ntBASIC18.79■□□□□ 0.6
CSPG5O95196 AL020989.1-201ENST00000422979 469 ntBASIC18.79■□□□□ 0.6
CSPG5O95196 FAM8A3P-201ENST00000427218 844 ntBASIC18.79■□□□□ 0.6
CSPG5O95196 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CSPG5O95196 RPS15P9-201ENST00000494093 319 ntBASIC18.79■□□□□ 0.6
CSPG5O95196 YBX1P5-201ENST00000509441 847 ntBASIC18.79■□□□□ 0.6
CSPG5O95196 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC18.79■□□□□ 0.6
CSPG5O95196 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CSPG5O95196 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CSPG5O95196 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC18.79■□□□□ 0.6
CSPG5O95196 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC18.79■□□□□ 0.6
CSPG5O95196 AC092364.2-202ENST00000597012 1073 ntBASIC18.79■□□□□ 0.6
CSPG5O95196 C20orf181-201ENST00000623918 480 ntBASIC18.79■□□□□ 0.6
CSPG5O95196 ORC5-208ENST00000626700 344 ntTSL 3 BASIC18.79■□□□□ 0.6
CSPG5O95196 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CSPG5O95196 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.79■□□□□ 0.6
CSPG5O95196 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CSPG5O95196 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CSPG5O95196 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CSPG5O95196 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.79■□□□□ 0.6
CSPG5O95196 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CSPG5O95196 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
CSPG5O95196 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CSPG5O95196 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CSPG5O95196 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CSPG5O95196 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CSPG5O95196 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC18.78■□□□□ 0.6
CSPG5O95196 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CSPG5O95196 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CSPG5O95196 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CSPG5O95196 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CSPG5O95196 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CSPG5O95196 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CSPG5O95196 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CSPG5O95196 CALY-203ENST00000368558 825 ntTSL 5 BASIC18.78■□□□□ 0.6
CSPG5O95196 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.78■□□□□ 0.6
CSPG5O95196 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CSPG5O95196 SYS1-203ENST00000414310 795 ntTSL 3 BASIC18.78■□□□□ 0.6
CSPG5O95196 AL645939.2-201ENST00000427340 991 ntBASIC18.78■□□□□ 0.6
CSPG5O95196 LHX6-205ENST00000464484 666 ntTSL 2 BASIC18.78■□□□□ 0.6
CSPG5O95196 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC18.78■□□□□ 0.6
CSPG5O95196 CFL1-212ENST00000531413 636 ntTSL 3 BASIC18.78■□□□□ 0.6
CSPG5O95196 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CSPG5O95196 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.78■□□□□ 0.6
CSPG5O95196 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC18.78■□□□□ 0.6
CSPG5O95196 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.78■□□□□ 0.6
CSPG5O95196 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC18.78■□□□□ 0.6
CSPG5O95196 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CSPG5O95196 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CSPG5O95196 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CSPG5O95196 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CSPG5O95196 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CSPG5O95196 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CSPG5O95196 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CSPG5O95196 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CSPG5O95196 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CSPG5O95196 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
CSPG5O95196 BCAR1-209ENST00000546196 1340 ntBASIC18.77■□□□□ 0.6
CSPG5O95196 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CSPG5O95196 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
CSPG5O95196 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CSPG5O95196 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.77■□□□□ 0.6
CSPG5O95196 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CSPG5O95196 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CSPG5O95196 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CSPG5O95196 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CSPG5O95196 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC18.77■□□□□ 0.6
CSPG5O95196 PNMT-202ENST00000394246 821 ntTSL 2 BASIC18.77■□□□□ 0.6
CSPG5O95196 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC18.77■□□□□ 0.6
CSPG5O95196 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
CSPG5O95196 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CSPG5O95196 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.77■□□□□ 0.6
CSPG5O95196 AC027612.4-201ENST00000605371 583 ntBASIC18.77■□□□□ 0.6
CSPG5O95196 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC18.77■□□□□ 0.6
CSPG5O95196 AL589182.2-201ENST00000619332 1049 ntBASIC18.77■□□□□ 0.6
CSPG5O95196 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CSPG5O95196 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CSPG5O95196 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
CSPG5O95196 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
CSPG5O95196 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CSPG5O95196 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
CSPG5O95196 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CSPG5O95196 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CSPG5O95196 AC132938.5-201ENST00000624980 1813 ntBASIC18.77■□□□□ 0.59
CSPG5O95196 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.76■□□□□ 0.59
CSPG5O95196 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CSPG5O95196 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.76■□□□□ 0.59
CSPG5O95196 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CSPG5O95196 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.76■□□□□ 0.59
CSPG5O95196 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms