Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NKX2-2O95096 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.16■□□□□ 0.18
NKX2-2O95096 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
NKX2-2O95096 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NKX2-2O95096 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
NKX2-2O95096 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NKX2-2O95096 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NKX2-2O95096 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
NKX2-2O95096 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
NKX2-2O95096 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NKX2-2O95096 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NKX2-2O95096 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.16■□□□□ 0.18
NKX2-2O95096 KLF4P1-201ENST00000412782 1185 ntBASIC16.16■□□□□ 0.18
NKX2-2O95096 ABCD1P5-201ENST00000445663 754 ntBASIC16.16■□□□□ 0.18
NKX2-2O95096 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.16■□□□□ 0.18
NKX2-2O95096 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.16■□□□□ 0.18
NKX2-2O95096 MIR3652-201ENST00000579335 131 ntBASIC16.16■□□□□ 0.18
NKX2-2O95096 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.16■□□□□ 0.18
NKX2-2O95096 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NKX2-2O95096 AC138894.3-201ENST00000603787 634 ntBASIC16.16■□□□□ 0.18
NKX2-2O95096 AL591684.3-201ENST00000605187 298 ntBASIC16.16■□□□□ 0.18
NKX2-2O95096 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.16■□□□□ 0.18
NKX2-2O95096 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NKX2-2O95096 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NKX2-2O95096 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NKX2-2O95096 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NKX2-2O95096 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NKX2-2O95096 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NKX2-2O95096 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
NKX2-2O95096 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NKX2-2O95096 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NKX2-2O95096 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NKX2-2O95096 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
NKX2-2O95096 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NKX2-2O95096 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
NKX2-2O95096 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
NKX2-2O95096 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NKX2-2O95096 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
NKX2-2O95096 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
NKX2-2O95096 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NKX2-2O95096 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NKX2-2O95096 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NKX2-2O95096 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NKX2-2O95096 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
NKX2-2O95096 FZD10-202ENST00000539839 3282 ntBASIC16.15■□□□□ 0.18
NKX2-2O95096 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.15■□□□□ 0.18
NKX2-2O95096 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.15■□□□□ 0.18
NKX2-2O95096 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.15■□□□□ 0.18
NKX2-2O95096 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
NKX2-2O95096 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NKX2-2O95096 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.15■□□□□ 0.18
NKX2-2O95096 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
NKX2-2O95096 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.15■□□□□ 0.18
NKX2-2O95096 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.15■□□□□ 0.18
NKX2-2O95096 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
NKX2-2O95096 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.15■□□□□ 0.18
NKX2-2O95096 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.15■□□□□ 0.18
NKX2-2O95096 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NKX2-2O95096 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
NKX2-2O95096 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NKX2-2O95096 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
NKX2-2O95096 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.15■□□□□ 0.18
NKX2-2O95096 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NKX2-2O95096 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NKX2-2O95096 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
NKX2-2O95096 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NKX2-2O95096 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NKX2-2O95096 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NKX2-2O95096 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
NKX2-2O95096 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NKX2-2O95096 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NKX2-2O95096 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NKX2-2O95096 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.18
NKX2-2O95096 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
NKX2-2O95096 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
NKX2-2O95096 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
NKX2-2O95096 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.14■□□□□ 0.17
NKX2-2O95096 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NKX2-2O95096 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NKX2-2O95096 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NKX2-2O95096 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
NKX2-2O95096 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
NKX2-2O95096 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.14■□□□□ 0.17
NKX2-2O95096 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NKX2-2O95096 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
NKX2-2O95096 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.14■□□□□ 0.17
NKX2-2O95096 SLC25A1P3-201ENST00000395415 828 ntBASIC16.14■□□□□ 0.17
NKX2-2O95096 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NKX2-2O95096 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.14■□□□□ 0.17
NKX2-2O95096 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NKX2-2O95096 FOSL1P1-201ENST00000511041 816 ntBASIC16.14■□□□□ 0.17
NKX2-2O95096 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.14■□□□□ 0.17
NKX2-2O95096 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.14■□□□□ 0.17
NKX2-2O95096 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.14■□□□□ 0.17
NKX2-2O95096 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.14■□□□□ 0.17
NKX2-2O95096 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NKX2-2O95096 AP001094.4-201ENST00000579008 2176 ntBASIC16.14■□□□□ 0.17
NKX2-2O95096 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NKX2-2O95096 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
NKX2-2O95096 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms