Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 AC092119.3-201ENST00000612618 583 ntBASIC20.39■□□□□ 0.85
CDKL5O76039 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC20.39■□□□□ 0.85
CDKL5O76039 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC20.39■□□□□ 0.85
CDKL5O76039 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC20.39■□□□□ 0.85
CDKL5O76039 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
CDKL5O76039 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDKL5O76039 BANP-227ENST00000626016 2144 ntTSL 2 BASIC20.39■□□□□ 0.85
CDKL5O76039 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDKL5O76039 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDKL5O76039 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC20.39■□□□□ 0.85
CDKL5O76039 AC020916.1-201ENST00000587762 1774 ntBASIC20.39■□□□□ 0.85
CDKL5O76039 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CDKL5O76039 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDKL5O76039 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDKL5O76039 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC20.38■□□□□ 0.85
CDKL5O76039 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDKL5O76039 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CDKL5O76039 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC20.38■□□□□ 0.85
CDKL5O76039 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC20.38■□□□□ 0.85
CDKL5O76039 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDKL5O76039 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC20.38■□□□□ 0.85
CDKL5O76039 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDKL5O76039 POM121L3P-201ENST00000419331 1163 ntBASIC20.38■□□□□ 0.85
CDKL5O76039 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC20.38■□□□□ 0.85
CDKL5O76039 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC20.38■□□□□ 0.85
CDKL5O76039 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CDKL5O76039 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CDKL5O76039 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC20.38■□□□□ 0.85
CDKL5O76039 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDKL5O76039 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC20.38■□□□□ 0.85
CDKL5O76039 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CDKL5O76039 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDKL5O76039 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CDKL5O76039 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDKL5O76039 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDKL5O76039 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDKL5O76039 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDKL5O76039 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CDKL5O76039 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDKL5O76039 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CDKL5O76039 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDKL5O76039 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC20.37■□□□□ 0.85
CDKL5O76039 AL353593.2-201ENST00000602529 1483 ntBASIC20.37■□□□□ 0.85
CDKL5O76039 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
CDKL5O76039 KRT8P10-201ENST00000450021 1447 ntBASIC20.37■□□□□ 0.85
CDKL5O76039 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDKL5O76039 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CDKL5O76039 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDKL5O76039 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
CDKL5O76039 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CDKL5O76039 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDKL5O76039 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CDKL5O76039 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
CDKL5O76039 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CDKL5O76039 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CDKL5O76039 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC20.37■□□□□ 0.85
CDKL5O76039 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC20.37■□□□□ 0.85
CDKL5O76039 STK25P1-201ENST00000585406 838 ntBASIC20.37■□□□□ 0.85
CDKL5O76039 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC20.37■□□□□ 0.85
CDKL5O76039 AC114341.1-201ENST00000618070 349 ntBASIC20.37■□□□□ 0.85
CDKL5O76039 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
CDKL5O76039 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CDKL5O76039 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CDKL5O76039 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDKL5O76039 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDKL5O76039 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDKL5O76039 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDKL5O76039 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC20.37■□□□□ 0.85
CDKL5O76039 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CDKL5O76039 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC20.37■□□□□ 0.85
CDKL5O76039 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDKL5O76039 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDKL5O76039 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CDKL5O76039 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDKL5O76039 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDKL5O76039 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDKL5O76039 INTS4P1-201ENST00000438455 1935 ntBASIC20.36■□□□□ 0.85
CDKL5O76039 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDKL5O76039 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDKL5O76039 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC20.36■□□□□ 0.85
CDKL5O76039 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
CDKL5O76039 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDKL5O76039 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC20.36■□□□□ 0.85
CDKL5O76039 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
CDKL5O76039 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
CDKL5O76039 AC093458.2-201ENST00000623150 629 ntBASIC20.36■□□□□ 0.85
CDKL5O76039 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CDKL5O76039 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDKL5O76039 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDKL5O76039 FUT8-AS1-201ENST00000621019 1521 ntBASIC20.36■□□□□ 0.85
CDKL5O76039 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CDKL5O76039 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC20.36■□□□□ 0.85
CDKL5O76039 AC046185.3-201ENST00000623228 1824 ntBASIC20.36■□□□□ 0.85
CDKL5O76039 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDKL5O76039 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDKL5O76039 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC20.36■□□□□ 0.85
CDKL5O76039 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC20.36■□□□□ 0.85
CDKL5O76039 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC20.35■□□□□ 0.85
CDKL5O76039 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC20.35■□□□□ 0.85
CDKL5O76039 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms