Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NDUFS3O75489 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NDUFS3O75489 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
NDUFS3O75489 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.5■□□□□ 0.39
NDUFS3O75489 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.5■□□□□ 0.39
NDUFS3O75489 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.5■□□□□ 0.39
NDUFS3O75489 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.5■□□□□ 0.39
NDUFS3O75489 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
NDUFS3O75489 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NDUFS3O75489 CROCCP2-202ENST00000412962 2773 ntBASIC17.5■□□□□ 0.39
NDUFS3O75489 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NDUFS3O75489 AC106820.2-201ENST00000563775 3264 ntBASIC17.5■□□□□ 0.39
NDUFS3O75489 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.5■□□□□ 0.39
NDUFS3O75489 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NDUFS3O75489 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.5■□□□□ 0.39
NDUFS3O75489 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
NDUFS3O75489 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
NDUFS3O75489 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
NDUFS3O75489 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NDUFS3O75489 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NDUFS3O75489 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
NDUFS3O75489 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
NDUFS3O75489 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NDUFS3O75489 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NDUFS3O75489 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NDUFS3O75489 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.49■□□□□ 0.39
NDUFS3O75489 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
NDUFS3O75489 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.49■□□□□ 0.39
NDUFS3O75489 IGHV3-52-201ENST00000519770 353 ntBASIC17.49■□□□□ 0.39
NDUFS3O75489 AC009533.2-201ENST00000543664 586 ntBASIC17.49■□□□□ 0.39
NDUFS3O75489 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
NDUFS3O75489 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.49■□□□□ 0.39
NDUFS3O75489 AP002414.4-201ENST00000589764 1148 ntBASIC17.49■□□□□ 0.39
NDUFS3O75489 Z69720.1-201ENST00000601483 472 ntBASIC17.49■□□□□ 0.39
NDUFS3O75489 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NDUFS3O75489 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.49■□□□□ 0.39
NDUFS3O75489 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
NDUFS3O75489 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.49■□□□□ 0.39
NDUFS3O75489 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NDUFS3O75489 AC233702.3-201ENST00000578656 1387 ntBASIC17.49■□□□□ 0.39
NDUFS3O75489 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NDUFS3O75489 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NDUFS3O75489 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NDUFS3O75489 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
NDUFS3O75489 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NDUFS3O75489 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
NDUFS3O75489 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NDUFS3O75489 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.48■□□□□ 0.39
NDUFS3O75489 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NDUFS3O75489 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.48■□□□□ 0.39
NDUFS3O75489 LYSMD4-203ENST00000378904 2122 ntBASIC17.48■□□□□ 0.39
NDUFS3O75489 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.48■□□□□ 0.39
NDUFS3O75489 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
NDUFS3O75489 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NDUFS3O75489 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.48■□□□□ 0.39
NDUFS3O75489 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NDUFS3O75489 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NDUFS3O75489 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.48■□□□□ 0.39
NDUFS3O75489 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.48■□□□□ 0.39
NDUFS3O75489 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NDUFS3O75489 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.48■□□□□ 0.39
NDUFS3O75489 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NDUFS3O75489 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NDUFS3O75489 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NDUFS3O75489 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NDUFS3O75489 FAM220CP-201ENST00000395253 831 ntBASIC17.48■□□□□ 0.39
NDUFS3O75489 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
NDUFS3O75489 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.48■□□□□ 0.39
NDUFS3O75489 DRAXINP1-201ENST00000437611 948 ntBASIC17.48■□□□□ 0.39
NDUFS3O75489 AP002383.4-201ENST00000442518 975 ntBASIC17.48■□□□□ 0.39
NDUFS3O75489 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.48■□□□□ 0.39
NDUFS3O75489 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.48■□□□□ 0.39
NDUFS3O75489 AC091607.1-201ENST00000490318 1060 ntBASIC17.48■□□□□ 0.39
NDUFS3O75489 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.48■□□□□ 0.39
NDUFS3O75489 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
NDUFS3O75489 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.48■□□□□ 0.39
NDUFS3O75489 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.48■□□□□ 0.39
NDUFS3O75489 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NDUFS3O75489 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NDUFS3O75489 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
NDUFS3O75489 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
NDUFS3O75489 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
NDUFS3O75489 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
NDUFS3O75489 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NDUFS3O75489 SIRPAP1-201ENST00000448467 1770 ntBASIC17.48■□□□□ 0.39
NDUFS3O75489 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
NDUFS3O75489 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NDUFS3O75489 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NDUFS3O75489 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NDUFS3O75489 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
NDUFS3O75489 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NDUFS3O75489 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
NDUFS3O75489 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.47■□□□□ 0.39
NDUFS3O75489 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NDUFS3O75489 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NDUFS3O75489 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NDUFS3O75489 MYCLP1-201ENST00000372451 1075 ntBASIC17.47■□□□□ 0.39
NDUFS3O75489 PPIH-202ENST00000372549 327 ntTSL 3 BASIC17.47■□□□□ 0.39
NDUFS3O75489 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
NDUFS3O75489 AC103564.2-201ENST00000432853 1299 ntBASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms