Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
USH2AO75445 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC7.72□□□□□ -1.17
USH2AO75445 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
USH2AO75445 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
USH2AO75445 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC7.72□□□□□ -1.17
USH2AO75445 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
USH2AO75445 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
USH2AO75445 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
USH2AO75445 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC7.72□□□□□ -1.17
USH2AO75445 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC7.72□□□□□ -1.17
USH2AO75445 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC7.72□□□□□ -1.17
USH2AO75445 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC7.72□□□□□ -1.17
USH2AO75445 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC7.72□□□□□ -1.17
USH2AO75445 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
USH2AO75445 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
USH2AO75445 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
USH2AO75445 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC7.72□□□□□ -1.17
USH2AO75445 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
USH2AO75445 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC7.72□□□□□ -1.17
USH2AO75445 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC7.72□□□□□ -1.17
USH2AO75445 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC7.72□□□□□ -1.17
USH2AO75445 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC7.72□□□□□ -1.17
USH2AO75445 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
USH2AO75445 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
USH2AO75445 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC7.72□□□□□ -1.17
USH2AO75445 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
USH2AO75445 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
USH2AO75445 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
USH2AO75445 HNRNPA3P1-201ENST00000401429 1139 ntBASIC7.72□□□□□ -1.17
USH2AO75445 AC099336.1-201ENST00000417053 1171 ntBASIC7.72□□□□□ -1.17
USH2AO75445 HNRNPA3P5-201ENST00000455201 833 ntBASIC7.72□□□□□ -1.17
USH2AO75445 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC7.72□□□□□ -1.17
USH2AO75445 AL583810.1-201ENST00000553344 1045 ntBASIC7.72□□□□□ -1.17
USH2AO75445 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC7.72□□□□□ -1.17
USH2AO75445 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC7.72□□□□□ -1.17
USH2AO75445 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC7.72□□□□□ -1.17
USH2AO75445 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC7.72□□□□□ -1.17
USH2AO75445 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
USH2AO75445 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
USH2AO75445 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
USH2AO75445 MYLKP1-201ENST00000509077 1580 ntBASIC7.72□□□□□ -1.17
USH2AO75445 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC7.72□□□□□ -1.17
USH2AO75445 AL023806.1-201ENST00000603994 1649 ntBASIC7.72□□□□□ -1.17
USH2AO75445 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC7.72□□□□□ -1.17
USH2AO75445 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
USH2AO75445 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
USH2AO75445 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC7.72□□□□□ -1.17
USH2AO75445 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC7.72□□□□□ -1.17
USH2AO75445 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
USH2AO75445 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
USH2AO75445 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC7.72□□□□□ -1.17
USH2AO75445 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
USH2AO75445 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
USH2AO75445 HIST1H2BPS3-201ENST00000419683 341 ntBASIC7.72□□□□□ -1.17
USH2AO75445 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC7.72□□□□□ -1.17
USH2AO75445 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC7.72□□□□□ -1.17
USH2AO75445 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC7.72□□□□□ -1.17
USH2AO75445 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
USH2AO75445 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
USH2AO75445 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
USH2AO75445 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
USH2AO75445 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC7.71□□□□□ -1.17
USH2AO75445 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
USH2AO75445 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
USH2AO75445 AC091046.1-201ENST00000331871 207 ntBASIC7.71□□□□□ -1.17
USH2AO75445 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
USH2AO75445 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.17
USH2AO75445 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
USH2AO75445 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.17
USH2AO75445 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.17
USH2AO75445 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.17
USH2AO75445 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
USH2AO75445 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC7.71□□□□□ -1.17
USH2AO75445 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC7.71□□□□□ -1.17
USH2AO75445 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC7.71□□□□□ -1.17
USH2AO75445 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC7.71□□□□□ -1.17
USH2AO75445 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC7.71□□□□□ -1.17
USH2AO75445 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.17
USH2AO75445 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
USH2AO75445 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
USH2AO75445 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC7.71□□□□□ -1.17
USH2AO75445 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
USH2AO75445 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
USH2AO75445 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
USH2AO75445 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.17
USH2AO75445 AC020907.1-201ENST00000616460 1350 ntBASIC7.71□□□□□ -1.17
USH2AO75445 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
USH2AO75445 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
USH2AO75445 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC7.71□□□□□ -1.18
USH2AO75445 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC7.71□□□□□ -1.18
USH2AO75445 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC7.71□□□□□ -1.18
USH2AO75445 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
USH2AO75445 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
USH2AO75445 PXK-206ENST00000463280 2825 ntTSL 2 BASIC7.71□□□□□ -1.18
USH2AO75445 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.18
USH2AO75445 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC7.71□□□□□ -1.18
USH2AO75445 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.18
USH2AO75445 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC7.71□□□□□ -1.18
USH2AO75445 GABARAPL3-202ENST00000624044 1851 ntBASIC7.71□□□□□ -1.18
USH2AO75445 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms