Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 MTMR9LP-203ENST00000426597 1545 ntBASIC15.66■□□□□ 0.1
PFDN1O60925 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PFDN1O60925 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
PFDN1O60925 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PFDN1O60925 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
PFDN1O60925 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.66■□□□□ 0.1
PFDN1O60925 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PFDN1O60925 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.66■□□□□ 0.1
PFDN1O60925 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PFDN1O60925 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PFDN1O60925 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PFDN1O60925 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PFDN1O60925 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PFDN1O60925 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PFDN1O60925 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
PFDN1O60925 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PFDN1O60925 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PFDN1O60925 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PFDN1O60925 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PFDN1O60925 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PFDN1O60925 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PFDN1O60925 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PFDN1O60925 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
PFDN1O60925 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PFDN1O60925 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PFDN1O60925 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.65■□□□□ 0.1
PFDN1O60925 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PFDN1O60925 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
PFDN1O60925 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
PFDN1O60925 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PFDN1O60925 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PFDN1O60925 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PFDN1O60925 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.65■□□□□ 0.1
PFDN1O60925 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PFDN1O60925 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PFDN1O60925 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PFDN1O60925 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PFDN1O60925 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
PFDN1O60925 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC15.65■□□□□ 0.1
PFDN1O60925 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
PFDN1O60925 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC15.65■□□□□ 0.1
PFDN1O60925 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PFDN1O60925 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PFDN1O60925 AC012354.3-201ENST00000623734 483 ntBASIC15.65■□□□□ 0.1
PFDN1O60925 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PFDN1O60925 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
PFDN1O60925 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
PFDN1O60925 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PFDN1O60925 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PFDN1O60925 AC100803.2-201ENST00000562459 1963 ntBASIC15.65■□□□□ 0.1
PFDN1O60925 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
PFDN1O60925 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
PFDN1O60925 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC15.65■□□□□ 0.1
PFDN1O60925 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PFDN1O60925 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.65■□□□□ 0.1
PFDN1O60925 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC15.65■□□□□ 0.1
PFDN1O60925 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
PFDN1O60925 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PFDN1O60925 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PFDN1O60925 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
PFDN1O60925 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PFDN1O60925 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.65■□□□□ 0.1
PFDN1O60925 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
PFDN1O60925 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC15.64■□□□□ 0.1
PFDN1O60925 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.1
PFDN1O60925 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC15.64■□□□□ 0.09
PFDN1O60925 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
PFDN1O60925 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.64■□□□□ 0.09
PFDN1O60925 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.64■□□□□ 0.09
PFDN1O60925 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PFDN1O60925 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.64■□□□□ 0.09
PFDN1O60925 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
PFDN1O60925 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.64■□□□□ 0.09
PFDN1O60925 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PFDN1O60925 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
PFDN1O60925 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PFDN1O60925 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
PFDN1O60925 SERBP1P1-201ENST00000396021 1160 ntBASIC15.64■□□□□ 0.09
PFDN1O60925 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PFDN1O60925 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
PFDN1O60925 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC15.64■□□□□ 0.09
PFDN1O60925 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
PFDN1O60925 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
PFDN1O60925 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
PFDN1O60925 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC15.64■□□□□ 0.09
PFDN1O60925 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC15.64■□□□□ 0.09
PFDN1O60925 PRAL-201ENST00000624952 3286 ntBASIC15.64■□□□□ 0.09
PFDN1O60925 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC15.64■□□□□ 0.09
PFDN1O60925 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PFDN1O60925 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PFDN1O60925 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PFDN1O60925 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
PFDN1O60925 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
PFDN1O60925 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
PFDN1O60925 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PFDN1O60925 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PFDN1O60925 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
PFDN1O60925 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PFDN1O60925 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PFDN1O60925 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms