Protein–RNA interactions for Protein: O43812

DUX1, Double homeobox protein 1, humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX1O43812 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
DUX1O43812 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC16.76■□□□□ 0.27
DUX1O43812 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
DUX1O43812 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
DUX1O43812 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.76■□□□□ 0.27
DUX1O43812 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
DUX1O43812 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.76■□□□□ 0.27
DUX1O43812 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
DUX1O43812 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
DUX1O43812 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
DUX1O43812 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
DUX1O43812 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
DUX1O43812 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
DUX1O43812 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
DUX1O43812 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
DUX1O43812 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
DUX1O43812 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
DUX1O43812 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.75■□□□□ 0.27
DUX1O43812 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.75■□□□□ 0.27
DUX1O43812 YBX2P1-201ENST00000394192 760 ntBASIC16.75■□□□□ 0.27
DUX1O43812 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.75■□□□□ 0.27
DUX1O43812 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
DUX1O43812 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
DUX1O43812 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
DUX1O43812 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.75■□□□□ 0.27
DUX1O43812 UPF3AP3-201ENST00000420996 769 ntBASIC16.75■□□□□ 0.27
DUX1O43812 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.75■□□□□ 0.27
DUX1O43812 AC004832.2-201ENST00000426397 482 ntBASIC16.75■□□□□ 0.27
DUX1O43812 PRSS29P-201ENST00000440800 595 ntBASIC16.75■□□□□ 0.27
DUX1O43812 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.75■□□□□ 0.27
DUX1O43812 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.75■□□□□ 0.27
DUX1O43812 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC16.75■□□□□ 0.27
DUX1O43812 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.75■□□□□ 0.27
DUX1O43812 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.75■□□□□ 0.27
DUX1O43812 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
DUX1O43812 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
DUX1O43812 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
DUX1O43812 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
DUX1O43812 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
DUX1O43812 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
DUX1O43812 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
DUX1O43812 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.75■□□□□ 0.27
DUX1O43812 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.75■□□□□ 0.27
DUX1O43812 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.75■□□□□ 0.27
DUX1O43812 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
DUX1O43812 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
DUX1O43812 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
DUX1O43812 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
DUX1O43812 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
DUX1O43812 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
DUX1O43812 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
DUX1O43812 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.74■□□□□ 0.27
DUX1O43812 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
DUX1O43812 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
DUX1O43812 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
DUX1O43812 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
DUX1O43812 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
DUX1O43812 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
DUX1O43812 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
DUX1O43812 AP002414.1-201ENST00000391405 1147 ntBASIC16.74■□□□□ 0.27
DUX1O43812 MRPL20P1-201ENST00000400819 433 ntBASIC16.74■□□□□ 0.27
DUX1O43812 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.74■□□□□ 0.27
DUX1O43812 ACTG1P4-201ENST00000425123 1122 ntBASIC16.74■□□□□ 0.27
DUX1O43812 GPX1P2-201ENST00000429271 606 ntBASIC16.74■□□□□ 0.27
DUX1O43812 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
DUX1O43812 VN2R19P-201ENST00000442399 1052 ntBASIC16.74■□□□□ 0.27
DUX1O43812 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.74■□□□□ 0.27
DUX1O43812 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.74■□□□□ 0.27
DUX1O43812 GGTLC5P-201ENST00000617623 998 ntBASIC16.74■□□□□ 0.27
DUX1O43812 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.74■□□□□ 0.27
DUX1O43812 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
DUX1O43812 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
DUX1O43812 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.74■□□□□ 0.27
DUX1O43812 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
DUX1O43812 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC16.74■□□□□ 0.27
DUX1O43812 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
DUX1O43812 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
DUX1O43812 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.74■□□□□ 0.27
DUX1O43812 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
DUX1O43812 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
DUX1O43812 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.73■□□□□ 0.27
DUX1O43812 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
DUX1O43812 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
DUX1O43812 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
DUX1O43812 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
DUX1O43812 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
DUX1O43812 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.73■□□□□ 0.27
DUX1O43812 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.73■□□□□ 0.27
DUX1O43812 AC046185.3-201ENST00000623228 1824 ntBASIC16.73■□□□□ 0.27
DUX1O43812 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
DUX1O43812 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
DUX1O43812 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
DUX1O43812 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.73■□□□□ 0.27
DUX1O43812 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
DUX1O43812 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
DUX1O43812 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
DUX1O43812 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.73■□□□□ 0.27
DUX1O43812 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.73■□□□□ 0.27
DUX1O43812 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.73■□□□□ 0.27
DUX1O43812 AC023274.1-201ENST00000418278 595 ntBASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms