Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAF3IP2O43734 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC15.63■□□□□ 0.09
TRAF3IP2O43734 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC15.63■□□□□ 0.09
TRAF3IP2O43734 KRT8P10-201ENST00000450021 1447 ntBASIC15.63■□□□□ 0.09
TRAF3IP2O43734 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRAF3IP2O43734 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC15.63■□□□□ 0.09
TRAF3IP2O43734 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAF3IP2O43734 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC15.63■□□□□ 0.09
TRAF3IP2O43734 POM121L3P-201ENST00000419331 1163 ntBASIC15.63■□□□□ 0.09
TRAF3IP2O43734 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
TRAF3IP2O43734 HCG4P8-203ENST00000443049 980 ntBASIC15.63■□□□□ 0.09
TRAF3IP2O43734 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAF3IP2O43734 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAF3IP2O43734 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC15.63■□□□□ 0.09
TRAF3IP2O43734 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC15.63■□□□□ 0.09
TRAF3IP2O43734 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC15.63■□□□□ 0.09
TRAF3IP2O43734 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
TRAF3IP2O43734 CCNC-219ENST00000627680 896 ntTSL 5 BASIC15.63■□□□□ 0.09
TRAF3IP2O43734 CEP83-AS1-201ENST00000623122 2482 ntBASIC15.63■□□□□ 0.09
TRAF3IP2O43734 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
TRAF3IP2O43734 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
TRAF3IP2O43734 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAF3IP2O43734 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAF3IP2O43734 AL353593.2-201ENST00000602529 1483 ntBASIC15.63■□□□□ 0.09
TRAF3IP2O43734 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
TRAF3IP2O43734 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRAF3IP2O43734 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
TRAF3IP2O43734 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAF3IP2O43734 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
TRAF3IP2O43734 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAF3IP2O43734 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
TRAF3IP2O43734 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRAF3IP2O43734 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC15.62■□□□□ 0.09
TRAF3IP2O43734 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAF3IP2O43734 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
TRAF3IP2O43734 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC15.62■□□□□ 0.09
TRAF3IP2O43734 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC15.62■□□□□ 0.09
TRAF3IP2O43734 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAF3IP2O43734 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAF3IP2O43734 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAF3IP2O43734 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
TRAF3IP2O43734 NMU-205ENST00000511469 756 ntTSL 3 BASIC15.62■□□□□ 0.09
TRAF3IP2O43734 PNN-202ENST00000553331 656 ntTSL 3 BASIC15.62■□□□□ 0.09
TRAF3IP2O43734 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC15.62■□□□□ 0.09
TRAF3IP2O43734 AC111152.3-201ENST00000569699 673 ntBASIC15.62■□□□□ 0.09
TRAF3IP2O43734 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC15.62■□□□□ 0.09
TRAF3IP2O43734 TK1-204ENST00000590430 683 ntTSL 3 BASIC15.62■□□□□ 0.09
TRAF3IP2O43734 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC15.62■□□□□ 0.09
TRAF3IP2O43734 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC15.62■□□□□ 0.09
TRAF3IP2O43734 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC15.62■□□□□ 0.09
TRAF3IP2O43734 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRAF3IP2O43734 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAF3IP2O43734 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
TRAF3IP2O43734 FZD10-202ENST00000539839 3282 ntBASIC15.62■□□□□ 0.09
TRAF3IP2O43734 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAF3IP2O43734 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.62■□□□□ 0.09
TRAF3IP2O43734 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRAF3IP2O43734 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC15.62■□□□□ 0.09
TRAF3IP2O43734 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
TRAF3IP2O43734 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
TRAF3IP2O43734 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRAF3IP2O43734 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
TRAF3IP2O43734 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAF3IP2O43734 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAF3IP2O43734 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAF3IP2O43734 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRAF3IP2O43734 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
TRAF3IP2O43734 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRAF3IP2O43734 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAF3IP2O43734 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC15.61■□□□□ 0.09
TRAF3IP2O43734 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAF3IP2O43734 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.61■□□□□ 0.09
TRAF3IP2O43734 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRAF3IP2O43734 NUS1P2-201ENST00000417358 873 ntBASIC15.61■□□□□ 0.09
TRAF3IP2O43734 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC15.61■□□□□ 0.09
TRAF3IP2O43734 STK25P1-201ENST00000585406 838 ntBASIC15.61■□□□□ 0.09
TRAF3IP2O43734 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC15.61■□□□□ 0.09
TRAF3IP2O43734 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRAF3IP2O43734 AD001527.2-201ENST00000622994 785 ntBASIC15.61■□□□□ 0.09
TRAF3IP2O43734 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRAF3IP2O43734 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAF3IP2O43734 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAF3IP2O43734 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAF3IP2O43734 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAF3IP2O43734 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAF3IP2O43734 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAF3IP2O43734 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRAF3IP2O43734 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAF3IP2O43734 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
TRAF3IP2O43734 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRAF3IP2O43734 AL023806.1-201ENST00000603994 1649 ntBASIC15.61■□□□□ 0.09
TRAF3IP2O43734 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC15.6■□□□□ 0.09
TRAF3IP2O43734 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
TRAF3IP2O43734 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC15.6■□□□□ 0.09
TRAF3IP2O43734 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC15.6■□□□□ 0.09
TRAF3IP2O43734 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAF3IP2O43734 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAF3IP2O43734 FUT8-AS1-201ENST00000621019 1521 ntBASIC15.6■□□□□ 0.09
TRAF3IP2O43734 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC15.6■□□□□ 0.09
TRAF3IP2O43734 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms