Protein–RNA interactions for Protein: O15041

SEMA3E, Semaphorin-3E, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3EO15041 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
SEMA3EO15041 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC21.02■□□□□ 0.96
SEMA3EO15041 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SEMA3EO15041 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC21.02■□□□□ 0.96
SEMA3EO15041 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC21.02■□□□□ 0.96
SEMA3EO15041 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
SEMA3EO15041 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC21.02■□□□□ 0.96
SEMA3EO15041 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC21.02■□□□□ 0.96
SEMA3EO15041 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.96
SEMA3EO15041 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC21.02■□□□□ 0.96
SEMA3EO15041 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
SEMA3EO15041 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SEMA3EO15041 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC21.02■□□□□ 0.96
SEMA3EO15041 NME9-203ENST00000383180 2133 ntTSL 2 BASIC21.02■□□□□ 0.96
SEMA3EO15041 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC21.02■□□□□ 0.96
SEMA3EO15041 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC21.02■□□□□ 0.96
SEMA3EO15041 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SEMA3EO15041 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
SEMA3EO15041 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC21.02■□□□□ 0.95
SEMA3EO15041 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
SEMA3EO15041 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
SEMA3EO15041 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SEMA3EO15041 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
SEMA3EO15041 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
SEMA3EO15041 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SEMA3EO15041 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC21.01■□□□□ 0.95
SEMA3EO15041 UPF3AP3-201ENST00000420996 769 ntBASIC21.01■□□□□ 0.95
SEMA3EO15041 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC21.01■□□□□ 0.95
SEMA3EO15041 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC21.01■□□□□ 0.95
SEMA3EO15041 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC21.01■□□□□ 0.95
SEMA3EO15041 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC21.01■□□□□ 0.95
SEMA3EO15041 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC21.01■□□□□ 0.95
SEMA3EO15041 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SEMA3EO15041 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SEMA3EO15041 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
SEMA3EO15041 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SEMA3EO15041 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SEMA3EO15041 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SEMA3EO15041 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC21■□□□□ 0.95
SEMA3EO15041 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC21■□□□□ 0.95
SEMA3EO15041 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC21■□□□□ 0.95
SEMA3EO15041 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
SEMA3EO15041 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC21■□□□□ 0.95
SEMA3EO15041 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SEMA3EO15041 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SEMA3EO15041 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SEMA3EO15041 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SEMA3EO15041 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC21■□□□□ 0.95
SEMA3EO15041 NABP1-203ENST00000409510 843 ntTSL 5 BASIC21■□□□□ 0.95
SEMA3EO15041 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC21■□□□□ 0.95
SEMA3EO15041 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC21■□□□□ 0.95
SEMA3EO15041 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC21■□□□□ 0.95
SEMA3EO15041 COX5A-206ENST00000568783 571 ntTSL 3 BASIC21■□□□□ 0.95
SEMA3EO15041 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC21■□□□□ 0.95
SEMA3EO15041 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC21■□□□□ 0.95
SEMA3EO15041 HOTTIP_1.1-201ENST00000620415 57 ntBASIC21■□□□□ 0.95
SEMA3EO15041 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC21■□□□□ 0.95
SEMA3EO15041 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SEMA3EO15041 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SEMA3EO15041 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC20.99■□□□□ 0.95
SEMA3EO15041 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
SEMA3EO15041 AC133963.1-201ENST00000504166 1679 ntBASIC20.99■□□□□ 0.95
SEMA3EO15041 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SEMA3EO15041 AC002310.6-201ENST00000624451 1377 ntBASIC20.99■□□□□ 0.95
SEMA3EO15041 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SEMA3EO15041 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SEMA3EO15041 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC20.99■□□□□ 0.95
SEMA3EO15041 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SEMA3EO15041 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
SEMA3EO15041 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC20.99■□□□□ 0.95
SEMA3EO15041 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SEMA3EO15041 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SEMA3EO15041 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SEMA3EO15041 RPSAP43-201ENST00000402237 625 ntBASIC20.99■□□□□ 0.95
SEMA3EO15041 IGLL3P-201ENST00000412472 434 ntBASIC20.99■□□□□ 0.95
SEMA3EO15041 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC20.99■□□□□ 0.95
SEMA3EO15041 GPX1P2-201ENST00000429271 606 ntBASIC20.99■□□□□ 0.95
SEMA3EO15041 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC20.99■□□□□ 0.95
SEMA3EO15041 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SEMA3EO15041 OR7E47P-204ENST00000575924 449 ntBASIC20.99■□□□□ 0.95
SEMA3EO15041 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC20.99■□□□□ 0.95
SEMA3EO15041 AC012183.1-201ENST00000625197 499 ntBASIC20.99■□□□□ 0.95
SEMA3EO15041 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SEMA3EO15041 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC20.99■□□□□ 0.95
SEMA3EO15041 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
SEMA3EO15041 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SEMA3EO15041 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SEMA3EO15041 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC20.99■□□□□ 0.95
SEMA3EO15041 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
SEMA3EO15041 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
SEMA3EO15041 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
SEMA3EO15041 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SEMA3EO15041 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC20.98■□□□□ 0.95
SEMA3EO15041 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC20.98■□□□□ 0.95
SEMA3EO15041 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SEMA3EO15041 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SEMA3EO15041 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
SEMA3EO15041 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SEMA3EO15041 MCCD1P2-201ENST00000423228 335 ntBASIC20.98■□□□□ 0.95
SEMA3EO15041 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms