Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ATP2A1O14983 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATP2A1O14983 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC20.02■□□□□ 0.8
ATP2A1O14983 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATP2A1O14983 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.02■□□□□ 0.8
ATP2A1O14983 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ATP2A1O14983 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ATP2A1O14983 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
ATP2A1O14983 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATP2A1O14983 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
ATP2A1O14983 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
ATP2A1O14983 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
ATP2A1O14983 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
ATP2A1O14983 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ATP2A1O14983 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ATP2A1O14983 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ATP2A1O14983 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
ATP2A1O14983 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ATP2A1O14983 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC20.01■□□□□ 0.79
ATP2A1O14983 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ATP2A1O14983 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ATP2A1O14983 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
ATP2A1O14983 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
ATP2A1O14983 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ATP2A1O14983 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC20.01■□□□□ 0.79
ATP2A1O14983 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC20.01■□□□□ 0.79
ATP2A1O14983 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC20.01■□□□□ 0.79
ATP2A1O14983 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC20.01■□□□□ 0.79
ATP2A1O14983 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
ATP2A1O14983 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC20.01■□□□□ 0.79
ATP2A1O14983 GGTLC5P-201ENST00000617623 998 ntBASIC20.01■□□□□ 0.79
ATP2A1O14983 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC20.01■□□□□ 0.79
ATP2A1O14983 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ATP2A1O14983 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC20.01■□□□□ 0.79
ATP2A1O14983 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ATP2A1O14983 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ATP2A1O14983 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ATP2A1O14983 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
ATP2A1O14983 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
ATP2A1O14983 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ATP2A1O14983 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20■□□□□ 0.79
ATP2A1O14983 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ATP2A1O14983 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20■□□□□ 0.79
ATP2A1O14983 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20■□□□□ 0.79
ATP2A1O14983 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC20■□□□□ 0.79
ATP2A1O14983 ATP6V0CP3-201ENST00000417255 467 ntBASIC20■□□□□ 0.79
ATP2A1O14983 YBX1P5-201ENST00000509441 847 ntBASIC20■□□□□ 0.79
ATP2A1O14983 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC20■□□□□ 0.79
ATP2A1O14983 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
ATP2A1O14983 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
ATP2A1O14983 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC20■□□□□ 0.79
ATP2A1O14983 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
ATP2A1O14983 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC20■□□□□ 0.79
ATP2A1O14983 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC20■□□□□ 0.79
ATP2A1O14983 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ATP2A1O14983 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC20■□□□□ 0.79
ATP2A1O14983 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20■□□□□ 0.79
ATP2A1O14983 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
ATP2A1O14983 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ATP2A1O14983 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC20■□□□□ 0.79
ATP2A1O14983 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ATP2A1O14983 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.99■□□□□ 0.79
ATP2A1O14983 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ATP2A1O14983 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
ATP2A1O14983 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC19.99■□□□□ 0.79
ATP2A1O14983 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.99■□□□□ 0.79
ATP2A1O14983 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC19.99■□□□□ 0.79
ATP2A1O14983 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.99■□□□□ 0.79
ATP2A1O14983 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.99■□□□□ 0.79
ATP2A1O14983 ENSA-206ENST00000361631 725 ntTSL 2 BASIC19.99■□□□□ 0.79
ATP2A1O14983 MRPL20P1-201ENST00000400819 433 ntBASIC19.99■□□□□ 0.79
ATP2A1O14983 IGLL3P-201ENST00000412472 434 ntBASIC19.99■□□□□ 0.79
ATP2A1O14983 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC19.99■□□□□ 0.79
ATP2A1O14983 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC19.99■□□□□ 0.79
ATP2A1O14983 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ATP2A1O14983 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC19.99■□□□□ 0.79
ATP2A1O14983 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC19.99■□□□□ 0.79
ATP2A1O14983 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ATP2A1O14983 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC19.99■□□□□ 0.79
ATP2A1O14983 AC134684.3-201ENST00000641758 218 ntBASIC19.99■□□□□ 0.79
ATP2A1O14983 AC092865.6-201ENST00000642101 219 ntBASIC19.99■□□□□ 0.79
ATP2A1O14983 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
ATP2A1O14983 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
ATP2A1O14983 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ATP2A1O14983 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
ATP2A1O14983 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.99■□□□□ 0.79
ATP2A1O14983 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.99■□□□□ 0.79
ATP2A1O14983 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ATP2A1O14983 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ATP2A1O14983 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ATP2A1O14983 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.98■□□□□ 0.79
ATP2A1O14983 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ATP2A1O14983 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ATP2A1O14983 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ATP2A1O14983 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ATP2A1O14983 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.98■□□□□ 0.79
ATP2A1O14983 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ATP2A1O14983 AC138028.4-201ENST00000564984 1845 ntBASIC19.98■□□□□ 0.79
ATP2A1O14983 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ATP2A1O14983 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms