Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 REXO1L11P-201ENST00000620964 1927 ntBASIC24.09■■□□□ 1.45
CHD2O14647 HNRNPRP1-201ENST00000453465 1695 ntBASIC24.08■■□□□ 1.45
CHD2O14647 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
CHD2O14647 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
CHD2O14647 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC24.08■■□□□ 1.45
CHD2O14647 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC24.08■■□□□ 1.45
CHD2O14647 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC24.08■■□□□ 1.45
CHD2O14647 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
CHD2O14647 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
CHD2O14647 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC24.08■■□□□ 1.45
CHD2O14647 AP000842.3-202ENST00000569238 1080 ntBASIC24.08■■□□□ 1.45
CHD2O14647 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC24.08■■□□□ 1.45
CHD2O14647 AC027307.3-201ENST00000594262 1100 ntBASIC24.08■■□□□ 1.45
CHD2O14647 AL590560.3-201ENST00000623350 461 ntBASIC24.08■■□□□ 1.45
CHD2O14647 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
CHD2O14647 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
CHD2O14647 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
CHD2O14647 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC24.08■■□□□ 1.45
CHD2O14647 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
CHD2O14647 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
CHD2O14647 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
CHD2O14647 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC24.08■■□□□ 1.45
CHD2O14647 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
CHD2O14647 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
CHD2O14647 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
CHD2O14647 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CHD2O14647 PIN1P1-201ENST00000412108 996 ntBASIC24.07■■□□□ 1.44
CHD2O14647 U91328.1-201ENST00000437528 223 ntBASIC24.07■■□□□ 1.44
CHD2O14647 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC24.07■■□□□ 1.44
CHD2O14647 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CHD2O14647 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC24.07■■□□□ 1.44
CHD2O14647 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC24.07■■□□□ 1.44
CHD2O14647 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC24.07■■□□□ 1.44
CHD2O14647 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC24.07■■□□□ 1.44
CHD2O14647 AL359881.2-201ENST00000602973 570 ntBASIC24.07■■□□□ 1.44
CHD2O14647 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CHD2O14647 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC24.07■■□□□ 1.44
CHD2O14647 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
CHD2O14647 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
CHD2O14647 CROCCP3-202ENST00000420820 1947 ntBASIC24.07■■□□□ 1.44
CHD2O14647 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CHD2O14647 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CHD2O14647 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC24.07■■□□□ 1.44
CHD2O14647 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC24.07■■□□□ 1.44
CHD2O14647 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC24.07■■□□□ 1.44
CHD2O14647 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC24.07■■□□□ 1.44
CHD2O14647 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC24.07■■□□□ 1.44
CHD2O14647 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CHD2O14647 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC24.07■■□□□ 1.44
CHD2O14647 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC24.07■■□□□ 1.44
CHD2O14647 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC24.07■■□□□ 1.44
CHD2O14647 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
CHD2O14647 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
CHD2O14647 AC022144.1-201ENST00000602255 1580 ntBASIC24.06■■□□□ 1.44
CHD2O14647 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CHD2O14647 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
CHD2O14647 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC24.06■■□□□ 1.44
CHD2O14647 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
CHD2O14647 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
CHD2O14647 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
CHD2O14647 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC24.06■■□□□ 1.44
CHD2O14647 TMPRSS11CP-201ENST00000453277 683 ntBASIC24.06■■□□□ 1.44
CHD2O14647 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
CHD2O14647 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC24.06■■□□□ 1.44
CHD2O14647 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC24.06■■□□□ 1.44
CHD2O14647 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
CHD2O14647 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC24.06■■□□□ 1.44
CHD2O14647 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC24.06■■□□□ 1.44
CHD2O14647 AL020996.1-203ENST00000536896 2307 ntBASIC24.06■■□□□ 1.44
CHD2O14647 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC24.06■■□□□ 1.44
CHD2O14647 NME2P1-201ENST00000426182 414 ntBASIC24.05■■□□□ 1.44
CHD2O14647 ATP5G2P4-201ENST00000442175 420 ntBASIC24.05■■□□□ 1.44
CHD2O14647 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
CHD2O14647 SATB1-217ENST00000493952 626 ntTSL 3 BASIC24.05■■□□□ 1.44
CHD2O14647 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC24.05■■□□□ 1.44
CHD2O14647 MIR3909-201ENST00000579518 119 ntBASIC24.05■■□□□ 1.44
CHD2O14647 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC24.05■■□□□ 1.44
CHD2O14647 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CHD2O14647 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CHD2O14647 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC24.05■■□□□ 1.44
CHD2O14647 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC24.05■■□□□ 1.44
CHD2O14647 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
CHD2O14647 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC24.05■■□□□ 1.44
CHD2O14647 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CHD2O14647 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC24.05■■□□□ 1.44
CHD2O14647 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
CHD2O14647 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CHD2O14647 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
CHD2O14647 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC24.05■■□□□ 1.44
CHD2O14647 AC022494.1-201ENST00000466044 728 ntBASIC24.05■■□□□ 1.44
CHD2O14647 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
CHD2O14647 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CHD2O14647 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
CHD2O14647 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC24.04■■□□□ 1.44
CHD2O14647 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CHD2O14647 CU639417.3-201ENST00000624240 1404 ntBASIC24.04■■□□□ 1.44
CHD2O14647 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC24.04■■□□□ 1.44
CHD2O14647 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CHD2O14647 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CHD2O14647 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC24.04■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms