Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 AC104794.3-201ENST00000566840 1248 ntBASIC27.98■■■□□ 2.07
CHD1O14646 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC27.98■■■□□ 2.07
CHD1O14646 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC27.98■■■□□ 2.07
CHD1O14646 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC27.98■■■□□ 2.07
CHD1O14646 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
CHD1O14646 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC27.98■■■□□ 2.07
CHD1O14646 AC007952.6-201ENST00000573168 2673 ntBASIC27.98■■■□□ 2.07
CHD1O14646 AC003957.1-201ENST00000625108 2673 ntBASIC27.98■■■□□ 2.07
CHD1O14646 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC27.98■■■□□ 2.07
CHD1O14646 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC27.98■■■□□ 2.07
CHD1O14646 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
CHD1O14646 AC098614.1-201ENST00000368528 745 ntBASIC27.98■■■□□ 2.07
CHD1O14646 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC27.98■■■□□ 2.07
CHD1O14646 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC27.98■■■□□ 2.07
CHD1O14646 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
CHD1O14646 RAB43P1-201ENST00000561790 589 ntBASIC27.98■■■□□ 2.07
CHD1O14646 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC27.98■■■□□ 2.07
CHD1O14646 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC27.98■■■□□ 2.07
CHD1O14646 AL135999.2-201ENST00000622438 1686 ntBASIC27.97■■■□□ 2.07
CHD1O14646 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
CHD1O14646 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC27.97■■■□□ 2.07
CHD1O14646 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC27.97■■■□□ 2.07
CHD1O14646 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC27.97■■■□□ 2.07
CHD1O14646 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC27.97■■■□□ 2.07
CHD1O14646 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC27.97■■■□□ 2.07
CHD1O14646 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC27.97■■■□□ 2.07
CHD1O14646 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC27.97■■■□□ 2.07
CHD1O14646 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC27.97■■■□□ 2.07
CHD1O14646 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC27.97■■■□□ 2.07
CHD1O14646 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC27.97■■■□□ 2.07
CHD1O14646 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC27.97■■■□□ 2.07
CHD1O14646 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC27.97■■■□□ 2.07
CHD1O14646 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC27.97■■■□□ 2.07
CHD1O14646 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
CHD1O14646 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
CHD1O14646 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
CHD1O14646 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
CHD1O14646 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC27.96■■■□□ 2.07
CHD1O14646 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC27.96■■■□□ 2.07
CHD1O14646 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC27.96■■■□□ 2.07
CHD1O14646 AC092552.1-201ENST00000547243 906 ntBASIC27.96■■■□□ 2.07
CHD1O14646 MIR4259-201ENST00000584466 101 ntBASIC27.96■■■□□ 2.07
CHD1O14646 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC27.96■■■□□ 2.07
CHD1O14646 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC27.96■■■□□ 2.07
CHD1O14646 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC27.96■■■□□ 2.07
CHD1O14646 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
CHD1O14646 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC27.96■■■□□ 2.07
CHD1O14646 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
CHD1O14646 ME2-218ENST00000640965 2476 ntTSL 5 BASIC27.96■■■□□ 2.07
CHD1O14646 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC27.95■■■□□ 2.07
CHD1O14646 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC27.95■■■□□ 2.07
CHD1O14646 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC27.95■■■□□ 2.07
CHD1O14646 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC27.95■■■□□ 2.07
CHD1O14646 BCYRN1-201ENST00000418539 200 ntBASIC27.95■■■□□ 2.07
CHD1O14646 AC007431.3-201ENST00000623221 587 ntBASIC27.95■■■□□ 2.07
CHD1O14646 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC27.95■■■□□ 2.07
CHD1O14646 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.07
CHD1O14646 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC27.95■■■□□ 2.06
CHD1O14646 REXO1L6P-201ENST00000603433 1515 ntBASIC27.95■■■□□ 2.06
CHD1O14646 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
CHD1O14646 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC27.95■■■□□ 2.06
CHD1O14646 AC142381.1-201ENST00000426099 345 ntBASIC27.95■■■□□ 2.06
CHD1O14646 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC27.95■■■□□ 2.06
CHD1O14646 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC27.95■■■□□ 2.06
CHD1O14646 AL031055.1-201ENST00000606362 631 ntBASIC27.95■■■□□ 2.06
CHD1O14646 AC068587.10-201ENST00000641210 219 ntBASIC27.95■■■□□ 2.06
CHD1O14646 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC27.95■■■□□ 2.06
CHD1O14646 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
CHD1O14646 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
CHD1O14646 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
CHD1O14646 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC27.94■■■□□ 2.06
CHD1O14646 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
CHD1O14646 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC27.94■■■□□ 2.06
CHD1O14646 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC27.94■■■□□ 2.06
CHD1O14646 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC27.94■■■□□ 2.06
CHD1O14646 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC27.94■■■□□ 2.06
CHD1O14646 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
CHD1O14646 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
CHD1O14646 MIR346-201ENST00000362234 95 ntBASIC27.94■■■□□ 2.06
CHD1O14646 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC27.94■■■□□ 2.06
CHD1O14646 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC27.94■■■□□ 2.06
CHD1O14646 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC27.94■■■□□ 2.06
CHD1O14646 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
CHD1O14646 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC27.94■■■□□ 2.06
CHD1O14646 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC27.94■■■□□ 2.06
CHD1O14646 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
CHD1O14646 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC27.94■■■□□ 2.06
CHD1O14646 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
CHD1O14646 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC27.94■■■□□ 2.06
CHD1O14646 GRAMD4P3-201ENST00000621665 1669 ntBASIC27.93■■■□□ 2.06
CHD1O14646 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
CHD1O14646 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
CHD1O14646 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC27.93■■■□□ 2.06
CHD1O14646 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
CHD1O14646 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
CHD1O14646 KRT223P-202ENST00000449164 1292 ntBASIC27.93■■■□□ 2.06
CHD1O14646 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC27.93■■■□□ 2.06
CHD1O14646 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
CHD1O14646 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC27.93■■■□□ 2.06
CHD1O14646 AC009407.1-201ENST00000568958 598 ntBASIC27.93■■■□□ 2.06
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms