Protein–RNA interactions for Protein: O00273

DFFA, DNA fragmentation factor subunit alpha, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFAO00273 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
DFFAO00273 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
DFFAO00273 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
DFFAO00273 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
DFFAO00273 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.03■□□□□ 0.48
DFFAO00273 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
DFFAO00273 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
DFFAO00273 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
DFFAO00273 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.03■□□□□ 0.48
DFFAO00273 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
DFFAO00273 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
DFFAO00273 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.03■□□□□ 0.48
DFFAO00273 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
DFFAO00273 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
DFFAO00273 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
DFFAO00273 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.03■□□□□ 0.48
DFFAO00273 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
DFFAO00273 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.03■□□□□ 0.48
DFFAO00273 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
DFFAO00273 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
DFFAO00273 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
DFFAO00273 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
DFFAO00273 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.03■□□□□ 0.48
DFFAO00273 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
DFFAO00273 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
DFFAO00273 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
DFFAO00273 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC18.03■□□□□ 0.48
DFFAO00273 AC103564.2-201ENST00000432853 1299 ntBASIC18.03■□□□□ 0.48
DFFAO00273 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.03■□□□□ 0.48
DFFAO00273 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.03■□□□□ 0.48
DFFAO00273 AC002558.1-201ENST00000488906 803 ntBASIC18.03■□□□□ 0.48
DFFAO00273 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.03■□□□□ 0.48
DFFAO00273 MIR5100-201ENST00000579544 119 ntBASIC18.03■□□□□ 0.48
DFFAO00273 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.03■□□□□ 0.48
DFFAO00273 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
DFFAO00273 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.03■□□□□ 0.48
DFFAO00273 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.03■□□□□ 0.48
DFFAO00273 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.03■□□□□ 0.48
DFFAO00273 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.03■□□□□ 0.48
DFFAO00273 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.03■□□□□ 0.48
DFFAO00273 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.03■□□□□ 0.48
DFFAO00273 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
DFFAO00273 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
DFFAO00273 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
DFFAO00273 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
DFFAO00273 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
DFFAO00273 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
DFFAO00273 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
DFFAO00273 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
DFFAO00273 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.03■□□□□ 0.48
DFFAO00273 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
DFFAO00273 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
DFFAO00273 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
DFFAO00273 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
DFFAO00273 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.02■□□□□ 0.48
DFFAO00273 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.02■□□□□ 0.48
DFFAO00273 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
DFFAO00273 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
DFFAO00273 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
DFFAO00273 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
DFFAO00273 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
DFFAO00273 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
DFFAO00273 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
DFFAO00273 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
DFFAO00273 NUS1P1-201ENST00000446295 882 ntBASIC18.02■□□□□ 0.48
DFFAO00273 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC18.02■□□□□ 0.48
DFFAO00273 KRT8P10-201ENST00000450021 1447 ntBASIC18.02■□□□□ 0.48
DFFAO00273 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
DFFAO00273 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.02■□□□□ 0.48
DFFAO00273 AC111152.3-201ENST00000569699 673 ntBASIC18.02■□□□□ 0.48
DFFAO00273 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.02■□□□□ 0.48
DFFAO00273 CLEC4GP1-201ENST00000596555 870 ntBASIC18.02■□□□□ 0.48
DFFAO00273 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.02■□□□□ 0.48
DFFAO00273 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
DFFAO00273 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
DFFAO00273 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.47
DFFAO00273 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
DFFAO00273 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.02■□□□□ 0.47
DFFAO00273 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.02■□□□□ 0.47
DFFAO00273 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.02■□□□□ 0.47
DFFAO00273 PP12613-201ENST00000424958 2230 ntBASIC18.02■□□□□ 0.47
DFFAO00273 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
DFFAO00273 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
DFFAO00273 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
DFFAO00273 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
DFFAO00273 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.01■□□□□ 0.47
DFFAO00273 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.01■□□□□ 0.47
DFFAO00273 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
DFFAO00273 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.01■□□□□ 0.47
DFFAO00273 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
DFFAO00273 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
DFFAO00273 AL049757.1-201ENST00000616842 1596 ntBASIC18.01■□□□□ 0.47
DFFAO00273 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
DFFAO00273 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.01■□□□□ 0.47
DFFAO00273 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
DFFAO00273 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.01■□□□□ 0.47
DFFAO00273 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.01■□□□□ 0.47
DFFAO00273 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC18.01■□□□□ 0.47
DFFAO00273 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC18.01■□□□□ 0.47
DFFAO00273 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms