Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC19.73■□□□□ 0.75
DDX39AO00148 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.73■□□□□ 0.75
DDX39AO00148 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
DDX39AO00148 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
DDX39AO00148 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
DDX39AO00148 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
DDX39AO00148 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
DDX39AO00148 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
DDX39AO00148 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
DDX39AO00148 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
DDX39AO00148 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
DDX39AO00148 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.72■□□□□ 0.75
DDX39AO00148 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
DDX39AO00148 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
DDX39AO00148 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
DDX39AO00148 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
DDX39AO00148 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
DDX39AO00148 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
DDX39AO00148 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
DDX39AO00148 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
DDX39AO00148 AC003669.1-201ENST00000334569 611 ntBASIC19.72■□□□□ 0.75
DDX39AO00148 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
DDX39AO00148 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
DDX39AO00148 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC19.72■□□□□ 0.75
DDX39AO00148 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.72■□□□□ 0.75
DDX39AO00148 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC19.72■□□□□ 0.75
DDX39AO00148 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
DDX39AO00148 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
DDX39AO00148 AC092910.1-201ENST00000482027 1129 ntBASIC19.72■□□□□ 0.75
DDX39AO00148 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC19.72■□□□□ 0.75
DDX39AO00148 SLC25A1P1-201ENST00000528351 927 ntBASIC19.72■□□□□ 0.75
DDX39AO00148 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
DDX39AO00148 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
DDX39AO00148 LITAF-211ENST00000572255 516 ntTSL 4 BASIC19.72■□□□□ 0.75
DDX39AO00148 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
DDX39AO00148 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC19.72■□□□□ 0.75
DDX39AO00148 STK25P1-201ENST00000585406 838 ntBASIC19.72■□□□□ 0.75
DDX39AO00148 AC073592.4-201ENST00000623827 446 ntBASIC19.72■□□□□ 0.75
DDX39AO00148 AC116407.3-201ENST00000623905 1129 ntBASIC19.72■□□□□ 0.75
DDX39AO00148 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
DDX39AO00148 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
DDX39AO00148 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
DDX39AO00148 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
DDX39AO00148 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
DDX39AO00148 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
DDX39AO00148 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
DDX39AO00148 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
DDX39AO00148 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.71■□□□□ 0.75
DDX39AO00148 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC19.71■□□□□ 0.75
DDX39AO00148 AC008764.6-201ENST00000595909 2069 ntBASIC19.71■□□□□ 0.75
DDX39AO00148 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
DDX39AO00148 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
DDX39AO00148 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
DDX39AO00148 SIGLEC16-201ENST00000599858 1437 ntBASIC19.71■□□□□ 0.75
DDX39AO00148 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
DDX39AO00148 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
DDX39AO00148 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
DDX39AO00148 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
DDX39AO00148 CENPM-204ENST00000402420 688 ntTSL 5 BASIC19.71■□□□□ 0.75
DDX39AO00148 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC19.71■□□□□ 0.75
DDX39AO00148 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC19.71■□□□□ 0.75
DDX39AO00148 AC139887.3-201ENST00000568585 713 ntBASIC19.71■□□□□ 0.75
DDX39AO00148 CYGB-205ENST00000590175 830 ntTSL 3 BASIC19.71■□□□□ 0.75
DDX39AO00148 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.71■□□□□ 0.75
DDX39AO00148 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
DDX39AO00148 AL355312.1-201ENST00000407115 2176 ntBASIC19.71■□□□□ 0.75
DDX39AO00148 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC19.71■□□□□ 0.75
DDX39AO00148 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
DDX39AO00148 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC19.71■□□□□ 0.75
DDX39AO00148 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.71■□□□□ 0.75
DDX39AO00148 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
DDX39AO00148 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC19.71■□□□□ 0.75
DDX39AO00148 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
DDX39AO00148 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19.71■□□□□ 0.74
DDX39AO00148 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
DDX39AO00148 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC19.7■□□□□ 0.74
DDX39AO00148 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
DDX39AO00148 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC19.7■□□□□ 0.74
DDX39AO00148 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
DDX39AO00148 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
DDX39AO00148 CSF3-203ENST00000394148 622 ntTSL 3 BASIC19.7■□□□□ 0.74
DDX39AO00148 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC19.7■□□□□ 0.74
DDX39AO00148 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC19.7■□□□□ 0.74
DDX39AO00148 AC002558.1-201ENST00000488906 803 ntBASIC19.7■□□□□ 0.74
DDX39AO00148 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC19.7■□□□□ 0.74
DDX39AO00148 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC19.7■□□□□ 0.74
DDX39AO00148 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
DDX39AO00148 BX640515.1-201ENST00000617215 977 ntBASIC19.7■□□□□ 0.74
DDX39AO00148 NME4-212ENST00000621774 904 ntTSL 3 BASIC19.7■□□□□ 0.74
DDX39AO00148 AC107918.4-202ENST00000641623 219 ntBASIC19.7■□□□□ 0.74
DDX39AO00148 AP002414.3-201ENST00000589352 1468 ntBASIC19.7■□□□□ 0.74
DDX39AO00148 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC19.7■□□□□ 0.74
DDX39AO00148 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
DDX39AO00148 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
DDX39AO00148 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
DDX39AO00148 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
DDX39AO00148 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
DDX39AO00148 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC19.69■□□□□ 0.74
DDX39AO00148 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
DDX39AO00148 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms