Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AC092028.1-203ENST00000608262 953 ntBASIC9.73□□□□□ -0.85
CHKB-CPT1BH3BT56 AC010997.5-201ENST00000609182 354 ntBASIC9.73□□□□□ -0.85
CHKB-CPT1BH3BT56 MIR7108-201ENST00000614319 87 ntBASIC9.73□□□□□ -0.85
CHKB-CPT1BH3BT56 PVT1_1.1-201ENST00000615125 194 ntBASIC9.73□□□□□ -0.85
CHKB-CPT1BH3BT56 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
CHKB-CPT1BH3BT56 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
CHKB-CPT1BH3BT56 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
CHKB-CPT1BH3BT56 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
CHKB-CPT1BH3BT56 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC9.73□□□□□ -0.85
CHKB-CPT1BH3BT56 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
CHKB-CPT1BH3BT56 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC9.73□□□□□ -0.85
CHKB-CPT1BH3BT56 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC9.73□□□□□ -0.85
CHKB-CPT1BH3BT56 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
CHKB-CPT1BH3BT56 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
CHKB-CPT1BH3BT56 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
CHKB-CPT1BH3BT56 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
CHKB-CPT1BH3BT56 ZNF815P-204ENST00000434898 1737 ntBASIC9.73□□□□□ -0.85
CHKB-CPT1BH3BT56 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC9.73□□□□□ -0.85
CHKB-CPT1BH3BT56 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
CHKB-CPT1BH3BT56 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC9.73□□□□□ -0.85
CHKB-CPT1BH3BT56 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
CHKB-CPT1BH3BT56 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
CHKB-CPT1BH3BT56 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
CHKB-CPT1BH3BT56 STARD13-202ENST00000336934 5917 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
CHKB-CPT1BH3BT56 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC9.73□□□□□ -0.85
CHKB-CPT1BH3BT56 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
CHKB-CPT1BH3BT56 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC9.73□□□□□ -0.85
CHKB-CPT1BH3BT56 KRT16P2-201ENST00000414673 1423 ntBASIC9.73□□□□□ -0.85
CHKB-CPT1BH3BT56 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
CHKB-CPT1BH3BT56 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
CHKB-CPT1BH3BT56 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
CHKB-CPT1BH3BT56 SLC6A19-201ENST00000304460 5174 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
CHKB-CPT1BH3BT56 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC9.72□□□□□ -0.85
CHKB-CPT1BH3BT56 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
CHKB-CPT1BH3BT56 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
CHKB-CPT1BH3BT56 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
CHKB-CPT1BH3BT56 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
CHKB-CPT1BH3BT56 MYH11-202ENST00000396324 6847 ntAPPRIS ALT1 TSL 1 (best) BASIC9.72□□□□□ -0.85
CHKB-CPT1BH3BT56 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
CHKB-CPT1BH3BT56 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC9.72□□□□□ -0.85
CHKB-CPT1BH3BT56 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
CHKB-CPT1BH3BT56 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
CHKB-CPT1BH3BT56 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC9.72□□□□□ -0.85
CHKB-CPT1BH3BT56 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
CHKB-CPT1BH3BT56 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
CHKB-CPT1BH3BT56 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
CHKB-CPT1BH3BT56 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
CHKB-CPT1BH3BT56 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
CHKB-CPT1BH3BT56 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
CHKB-CPT1BH3BT56 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
CHKB-CPT1BH3BT56 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
CHKB-CPT1BH3BT56 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC9.72□□□□□ -0.85
CHKB-CPT1BH3BT56 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC9.72□□□□□ -0.85
CHKB-CPT1BH3BT56 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
CHKB-CPT1BH3BT56 HLA-G-202ENST00000376815 851 ntBASIC9.72□□□□□ -0.85
CHKB-CPT1BH3BT56 HLA-G-203ENST00000376818 1127 ntBASIC9.72□□□□□ -0.85
CHKB-CPT1BH3BT56 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC9.72□□□□□ -0.85
CHKB-CPT1BH3BT56 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
CHKB-CPT1BH3BT56 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
CHKB-CPT1BH3BT56 MIR4508-201ENST00000584178 70 ntBASIC9.72□□□□□ -0.85
CHKB-CPT1BH3BT56 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
CHKB-CPT1BH3BT56 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC9.72□□□□□ -0.85
CHKB-CPT1BH3BT56 URGCP-201ENST00000336086 5658 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
CHKB-CPT1BH3BT56 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
CHKB-CPT1BH3BT56 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
CHKB-CPT1BH3BT56 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
CHKB-CPT1BH3BT56 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
CHKB-CPT1BH3BT56 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
CHKB-CPT1BH3BT56 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
CHKB-CPT1BH3BT56 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
CHKB-CPT1BH3BT56 FGFR1-211ENST00000425967 5375 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
CHKB-CPT1BH3BT56 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC9.72□□□□□ -0.85
CHKB-CPT1BH3BT56 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
CHKB-CPT1BH3BT56 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
CHKB-CPT1BH3BT56 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
CHKB-CPT1BH3BT56 AL137784.3-201ENST00000623858 2288 ntBASIC9.72□□□□□ -0.85
CHKB-CPT1BH3BT56 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
CHKB-CPT1BH3BT56 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
CHKB-CPT1BH3BT56 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
CHKB-CPT1BH3BT56 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
CHKB-CPT1BH3BT56 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
CHKB-CPT1BH3BT56 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
CHKB-CPT1BH3BT56 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC9.72□□□□□ -0.85
CHKB-CPT1BH3BT56 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
CHKB-CPT1BH3BT56 CIT-203ENST00000392521 8708 ntAPPRIS ALT1 TSL 1 (best) BASIC9.72□□□□□ -0.85
CHKB-CPT1BH3BT56 WT1-209ENST00000530998 2421 ntTSL 2 BASIC9.72□□□□□ -0.85
CHKB-CPT1BH3BT56 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC9.72□□□□□ -0.85
CHKB-CPT1BH3BT56 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
CHKB-CPT1BH3BT56 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
CHKB-CPT1BH3BT56 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
CHKB-CPT1BH3BT56 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
CHKB-CPT1BH3BT56 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
CHKB-CPT1BH3BT56 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
CHKB-CPT1BH3BT56 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC9.71□□□□□ -0.85
CHKB-CPT1BH3BT56 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC9.71□□□□□ -0.85
CHKB-CPT1BH3BT56 RAB3IP-212ENST00000550536 9646 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
CHKB-CPT1BH3BT56 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC9.71□□□□□ -0.85
CHKB-CPT1BH3BT56 AC093010.1-201ENST00000473625 1624 ntBASIC9.71□□□□□ -0.85
CHKB-CPT1BH3BT56 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
CHKB-CPT1BH3BT56 PTCH1-207ENST00000429896 6563 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms