Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
C4orf47A7E2U8 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.09■□□□□ 0.33
C4orf47A7E2U8 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.09■□□□□ 0.33
C4orf47A7E2U8 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.09■□□□□ 0.33
C4orf47A7E2U8 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.09■□□□□ 0.33
C4orf47A7E2U8 AC068137.2-201ENST00000605408 478 ntBASIC17.09■□□□□ 0.33
C4orf47A7E2U8 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
C4orf47A7E2U8 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.09■□□□□ 0.33
C4orf47A7E2U8 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.09■□□□□ 0.33
C4orf47A7E2U8 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.09■□□□□ 0.33
C4orf47A7E2U8 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
C4orf47A7E2U8 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
C4orf47A7E2U8 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.09■□□□□ 0.33
C4orf47A7E2U8 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.09■□□□□ 0.33
C4orf47A7E2U8 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.09■□□□□ 0.33
C4orf47A7E2U8 GMCL1P1-201ENST00000463439 1581 ntBASIC17.09■□□□□ 0.33
C4orf47A7E2U8 AL049757.1-201ENST00000616842 1596 ntBASIC17.09■□□□□ 0.33
C4orf47A7E2U8 AL121761.2-201ENST00000598007 1648 ntBASIC17.09■□□□□ 0.33
C4orf47A7E2U8 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.09■□□□□ 0.33
C4orf47A7E2U8 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
C4orf47A7E2U8 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.09■□□□□ 0.33
C4orf47A7E2U8 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
C4orf47A7E2U8 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
C4orf47A7E2U8 AL138781.2-201ENST00000617896 1843 ntBASIC17.09■□□□□ 0.33
C4orf47A7E2U8 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.09■□□□□ 0.33
C4orf47A7E2U8 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
C4orf47A7E2U8 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
C4orf47A7E2U8 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
C4orf47A7E2U8 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.08■□□□□ 0.33
C4orf47A7E2U8 AC007613.1-201ENST00000572811 2597 ntBASIC17.08■□□□□ 0.33
C4orf47A7E2U8 AC009113.1-201ENST00000570267 2443 ntBASIC17.08■□□□□ 0.33
C4orf47A7E2U8 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.08■□□□□ 0.33
C4orf47A7E2U8 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
C4orf47A7E2U8 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.08■□□□□ 0.32
C4orf47A7E2U8 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
C4orf47A7E2U8 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
C4orf47A7E2U8 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.08■□□□□ 0.32
C4orf47A7E2U8 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
C4orf47A7E2U8 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
C4orf47A7E2U8 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
C4orf47A7E2U8 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
C4orf47A7E2U8 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
C4orf47A7E2U8 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.08■□□□□ 0.32
C4orf47A7E2U8 GSAP-205ENST00000430584 600 ntTSL 5 BASIC17.08■□□□□ 0.32
C4orf47A7E2U8 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.08■□□□□ 0.32
C4orf47A7E2U8 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
C4orf47A7E2U8 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.08■□□□□ 0.32
C4orf47A7E2U8 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC17.08■□□□□ 0.32
C4orf47A7E2U8 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.08■□□□□ 0.32
C4orf47A7E2U8 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.08■□□□□ 0.32
C4orf47A7E2U8 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.08■□□□□ 0.32
C4orf47A7E2U8 AC012645.4-201ENST00000610691 1061 ntBASIC17.08■□□□□ 0.32
C4orf47A7E2U8 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
C4orf47A7E2U8 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
C4orf47A7E2U8 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
C4orf47A7E2U8 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
C4orf47A7E2U8 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
C4orf47A7E2U8 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
C4orf47A7E2U8 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
C4orf47A7E2U8 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
C4orf47A7E2U8 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
C4orf47A7E2U8 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
C4orf47A7E2U8 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
C4orf47A7E2U8 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
C4orf47A7E2U8 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.07■□□□□ 0.32
C4orf47A7E2U8 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
C4orf47A7E2U8 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
C4orf47A7E2U8 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
C4orf47A7E2U8 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.07■□□□□ 0.32
C4orf47A7E2U8 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
C4orf47A7E2U8 AC003669.1-201ENST00000334569 611 ntBASIC17.07■□□□□ 0.32
C4orf47A7E2U8 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
C4orf47A7E2U8 AP002414.1-201ENST00000391405 1147 ntBASIC17.07■□□□□ 0.32
C4orf47A7E2U8 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.07■□□□□ 0.32
C4orf47A7E2U8 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.07■□□□□ 0.32
C4orf47A7E2U8 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
C4orf47A7E2U8 AC067863.1-201ENST00000494933 530 ntBASIC17.07■□□□□ 0.32
C4orf47A7E2U8 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
C4orf47A7E2U8 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC17.07■□□□□ 0.32
C4orf47A7E2U8 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
C4orf47A7E2U8 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
C4orf47A7E2U8 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
C4orf47A7E2U8 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.07■□□□□ 0.32
C4orf47A7E2U8 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
C4orf47A7E2U8 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
C4orf47A7E2U8 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
C4orf47A7E2U8 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
C4orf47A7E2U8 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
C4orf47A7E2U8 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
C4orf47A7E2U8 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.07■□□□□ 0.32
C4orf47A7E2U8 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
C4orf47A7E2U8 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.07■□□□□ 0.32
C4orf47A7E2U8 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
C4orf47A7E2U8 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
C4orf47A7E2U8 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
C4orf47A7E2U8 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
C4orf47A7E2U8 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
C4orf47A7E2U8 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
C4orf47A7E2U8 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
C4orf47A7E2U8 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms