Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
MBD3L3A6NE82 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
MBD3L3A6NE82 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC15.33■□□□□ 0.04
MBD3L3A6NE82 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
MBD3L3A6NE82 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.33■□□□□ 0.04
MBD3L3A6NE82 MAL2-202ENST00000531508 892 ntTSL 3 BASIC15.33■□□□□ 0.04
MBD3L3A6NE82 AC096734.2-201ENST00000562054 433 ntBASIC15.33■□□□□ 0.04
MBD3L3A6NE82 AC018845.2-201ENST00000568326 409 ntBASIC15.33■□□□□ 0.04
MBD3L3A6NE82 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
MBD3L3A6NE82 OR7E47P-204ENST00000575924 449 ntBASIC15.33■□□□□ 0.04
MBD3L3A6NE82 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
MBD3L3A6NE82 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC15.33■□□□□ 0.04
MBD3L3A6NE82 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MBD3L3A6NE82 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MBD3L3A6NE82 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MBD3L3A6NE82 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MBD3L3A6NE82 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
MBD3L3A6NE82 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
MBD3L3A6NE82 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC15.33■□□□□ 0.04
MBD3L3A6NE82 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
MBD3L3A6NE82 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MBD3L3A6NE82 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
MBD3L3A6NE82 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
MBD3L3A6NE82 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC15.32■□□□□ 0.04
MBD3L3A6NE82 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MBD3L3A6NE82 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC15.32■□□□□ 0.04
MBD3L3A6NE82 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MBD3L3A6NE82 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
MBD3L3A6NE82 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MBD3L3A6NE82 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC15.32■□□□□ 0.04
MBD3L3A6NE82 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC15.32■□□□□ 0.04
MBD3L3A6NE82 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MBD3L3A6NE82 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC15.32■□□□□ 0.04
MBD3L3A6NE82 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MBD3L3A6NE82 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MBD3L3A6NE82 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC15.32■□□□□ 0.04
MBD3L3A6NE82 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
MBD3L3A6NE82 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MBD3L3A6NE82 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
MBD3L3A6NE82 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MBD3L3A6NE82 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MBD3L3A6NE82 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC15.32■□□□□ 0.04
MBD3L3A6NE82 AC092183.1-201ENST00000469884 875 ntBASIC15.32■□□□□ 0.04
MBD3L3A6NE82 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC15.32■□□□□ 0.04
MBD3L3A6NE82 POLD4-207ENST00000531239 584 ntTSL 2 BASIC15.32■□□□□ 0.04
MBD3L3A6NE82 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC15.32■□□□□ 0.04
MBD3L3A6NE82 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC15.32■□□□□ 0.04
MBD3L3A6NE82 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.32■□□□□ 0.04
MBD3L3A6NE82 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC15.32■□□□□ 0.04
MBD3L3A6NE82 AC010507.1-201ENST00000633895 436 ntBASIC15.32■□□□□ 0.04
MBD3L3A6NE82 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC15.32■□□□□ 0.04
MBD3L3A6NE82 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
MBD3L3A6NE82 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC15.32■□□□□ 0.04
MBD3L3A6NE82 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
MBD3L3A6NE82 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MBD3L3A6NE82 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MBD3L3A6NE82 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC15.32■□□□□ 0.04
MBD3L3A6NE82 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
MBD3L3A6NE82 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.32■□□□□ 0.04
MBD3L3A6NE82 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
MBD3L3A6NE82 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC15.32■□□□□ 0.04
MBD3L3A6NE82 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MBD3L3A6NE82 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MBD3L3A6NE82 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MBD3L3A6NE82 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
MBD3L3A6NE82 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MBD3L3A6NE82 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MBD3L3A6NE82 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
MBD3L3A6NE82 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
MBD3L3A6NE82 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
MBD3L3A6NE82 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MBD3L3A6NE82 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
MBD3L3A6NE82 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
MBD3L3A6NE82 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC15.31■□□□□ 0.04
MBD3L3A6NE82 RHOQP3-201ENST00000437982 621 ntBASIC15.31■□□□□ 0.04
MBD3L3A6NE82 AC004967.1-201ENST00000453589 447 ntBASIC15.31■□□□□ 0.04
MBD3L3A6NE82 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC15.31■□□□□ 0.04
MBD3L3A6NE82 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC15.31■□□□□ 0.04
MBD3L3A6NE82 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC15.31■□□□□ 0.04
MBD3L3A6NE82 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15.31■□□□□ 0.04
MBD3L3A6NE82 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC15.31■□□□□ 0.04
MBD3L3A6NE82 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC15.31■□□□□ 0.04
MBD3L3A6NE82 AC079781.4-201ENST00000641908 219 ntBASIC15.31■□□□□ 0.04
MBD3L3A6NE82 AC092865.6-201ENST00000642101 219 ntBASIC15.31■□□□□ 0.04
MBD3L3A6NE82 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC15.31■□□□□ 0.04
MBD3L3A6NE82 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MBD3L3A6NE82 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
MBD3L3A6NE82 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
MBD3L3A6NE82 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
MBD3L3A6NE82 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.31■□□□□ 0.04
MBD3L3A6NE82 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC15.31■□□□□ 0.04
MBD3L3A6NE82 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC15.31■□□□□ 0.04
MBD3L3A6NE82 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
MBD3L3A6NE82 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
MBD3L3A6NE82 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
MBD3L3A6NE82 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MBD3L3A6NE82 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC15.31■□□□□ 0.04
MBD3L3A6NE82 NME9-203ENST00000383180 2133 ntTSL 2 BASIC15.31■□□□□ 0.04
MBD3L3A6NE82 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC15.31■□□□□ 0.04
MBD3L3A6NE82 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms