Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
MEIS3P1A6NDR6 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.07■□□□□ 0
MEIS3P1A6NDR6 AC132872.4-202ENST00000622924 2756 ntBASIC15.07■□□□□ 0
MEIS3P1A6NDR6 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
MEIS3P1A6NDR6 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
MEIS3P1A6NDR6 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
MEIS3P1A6NDR6 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
MEIS3P1A6NDR6 AP003041.3-201ENST00000527151 707 ntBASIC15.07■□□□□ 0
MEIS3P1A6NDR6 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC15.07■□□□□ 0
MEIS3P1A6NDR6 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC15.07■□□□□ 0
MEIS3P1A6NDR6 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC15.07■□□□□ 0
MEIS3P1A6NDR6 TBCB-214ENST00000629269 413 ntTSL 5 BASIC15.07■□□□□ 0
MEIS3P1A6NDR6 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC15.07■□□□□ 0
MEIS3P1A6NDR6 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC15.07■□□□□ 0
MEIS3P1A6NDR6 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
MEIS3P1A6NDR6 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC15.07■□□□□ 0
MEIS3P1A6NDR6 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC15.07■□□□□ 0
MEIS3P1A6NDR6 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
MEIS3P1A6NDR6 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.07■□□□□ 0
MEIS3P1A6NDR6 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
MEIS3P1A6NDR6 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
MEIS3P1A6NDR6 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC15.07■□□□□ 0
MEIS3P1A6NDR6 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.07■□□□□ 0
MEIS3P1A6NDR6 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.06■□□□□ 0
MEIS3P1A6NDR6 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.06■□□□□ 0
MEIS3P1A6NDR6 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
MEIS3P1A6NDR6 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
MEIS3P1A6NDR6 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
MEIS3P1A6NDR6 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC15.06■□□□□ 0
MEIS3P1A6NDR6 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC15.06■□□□□ 0
MEIS3P1A6NDR6 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC15.06■□□□□ 0
MEIS3P1A6NDR6 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
MEIS3P1A6NDR6 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
MEIS3P1A6NDR6 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.06■□□□□ 0
MEIS3P1A6NDR6 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
MEIS3P1A6NDR6 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
MEIS3P1A6NDR6 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
MEIS3P1A6NDR6 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
MEIS3P1A6NDR6 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
MEIS3P1A6NDR6 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
MEIS3P1A6NDR6 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
MEIS3P1A6NDR6 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC15.06■□□□□ 0
MEIS3P1A6NDR6 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC15.06■□□□□ 0
MEIS3P1A6NDR6 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC15.06■□□□□ 0
MEIS3P1A6NDR6 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC15.06■□□□□ 0
MEIS3P1A6NDR6 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC15.06■□□□□ 0
MEIS3P1A6NDR6 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC15.06■□□□□ 0
MEIS3P1A6NDR6 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC15.06■□□□□ 0
MEIS3P1A6NDR6 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
MEIS3P1A6NDR6 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
MEIS3P1A6NDR6 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
MEIS3P1A6NDR6 AC116407.2-201ENST00000613639 860 ntBASIC15.06■□□□□ 0
MEIS3P1A6NDR6 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC15.06■□□□□ 0
MEIS3P1A6NDR6 SRI-203ENST00000419179 1307 ntTSL 2 BASIC15.06■□□□□ 0
MEIS3P1A6NDR6 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC15.06■□□□□ 0
MEIS3P1A6NDR6 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
MEIS3P1A6NDR6 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
MEIS3P1A6NDR6 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
MEIS3P1A6NDR6 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC15.06■□□□□ 0
MEIS3P1A6NDR6 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
MEIS3P1A6NDR6 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
MEIS3P1A6NDR6 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
MEIS3P1A6NDR6 LINC00167-201ENST00000530583 1419 ntBASIC15.06■□□□□ 0
MEIS3P1A6NDR6 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC15.06■□□□□ 0
MEIS3P1A6NDR6 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC15.06■□□□□ 0
MEIS3P1A6NDR6 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
MEIS3P1A6NDR6 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.06■□□□□ 0
MEIS3P1A6NDR6 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
MEIS3P1A6NDR6 AC092171.3-201ENST00000610122 2651 ntBASIC15.06■□□□□ 0
MEIS3P1A6NDR6 PCDHA1-201ENST00000378133 2726 ntBASIC15.06■□□□□ 0
MEIS3P1A6NDR6 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
MEIS3P1A6NDR6 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
MEIS3P1A6NDR6 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
MEIS3P1A6NDR6 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC15.06■□□□□ 0
MEIS3P1A6NDR6 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC15.06■□□□□ 0
MEIS3P1A6NDR6 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
MEIS3P1A6NDR6 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
MEIS3P1A6NDR6 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.05■□□□□ 0
MEIS3P1A6NDR6 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ 0
MEIS3P1A6NDR6 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.05■□□□□ 0
MEIS3P1A6NDR6 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
MEIS3P1A6NDR6 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.05■□□□□ 0
MEIS3P1A6NDR6 AL603756.1-201ENST00000606511 2163 ntBASIC15.05■□□□□ 0
MEIS3P1A6NDR6 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.05■□□□□ 0
MEIS3P1A6NDR6 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.05■□□□□ 0
MEIS3P1A6NDR6 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.05■□□□□ 0
MEIS3P1A6NDR6 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
MEIS3P1A6NDR6 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.05■□□□□ 0
MEIS3P1A6NDR6 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.05■□□□□ 0
MEIS3P1A6NDR6 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
MEIS3P1A6NDR6 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
MEIS3P1A6NDR6 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.05■□□□□ 0
MEIS3P1A6NDR6 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
MEIS3P1A6NDR6 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.05■□□□□ -0
MEIS3P1A6NDR6 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
MEIS3P1A6NDR6 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC15.05■□□□□ -0
MEIS3P1A6NDR6 AC128676.1-201ENST00000454392 318 ntBASIC15.05■□□□□ -0
MEIS3P1A6NDR6 RPPH1-201ENST00000516869 333 ntBASIC15.05■□□□□ -0
MEIS3P1A6NDR6 ADM-205ENST00000528544 586 ntTSL 2 BASIC15.05■□□□□ -0
MEIS3P1A6NDR6 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC15.05■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms