Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.66■□□□□ 0.26
LRIT2A6NDA9 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.66■□□□□ 0.26
LRIT2A6NDA9 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LRIT2A6NDA9 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.66■□□□□ 0.26
LRIT2A6NDA9 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.66■□□□□ 0.26
LRIT2A6NDA9 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.66■□□□□ 0.26
LRIT2A6NDA9 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.66■□□□□ 0.26
LRIT2A6NDA9 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LRIT2A6NDA9 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRIT2A6NDA9 AL732292.2-201ENST00000609649 430 ntBASIC16.66■□□□□ 0.26
LRIT2A6NDA9 AC012313.10-201ENST00000623509 926 ntBASIC16.66■□□□□ 0.26
LRIT2A6NDA9 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.66■□□□□ 0.26
LRIT2A6NDA9 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LRIT2A6NDA9 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LRIT2A6NDA9 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRIT2A6NDA9 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRIT2A6NDA9 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRIT2A6NDA9 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRIT2A6NDA9 AC046185.3-201ENST00000623228 1824 ntBASIC16.66■□□□□ 0.26
LRIT2A6NDA9 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
LRIT2A6NDA9 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.65■□□□□ 0.26
LRIT2A6NDA9 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRIT2A6NDA9 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LRIT2A6NDA9 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRIT2A6NDA9 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LRIT2A6NDA9 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
LRIT2A6NDA9 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
LRIT2A6NDA9 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.65■□□□□ 0.26
LRIT2A6NDA9 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRIT2A6NDA9 AC009336.1-201ENST00000608941 1553 ntBASIC16.65■□□□□ 0.26
LRIT2A6NDA9 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LRIT2A6NDA9 AL645608.8-201ENST00000606034 2086 ntBASIC16.65■□□□□ 0.26
LRIT2A6NDA9 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRIT2A6NDA9 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LRIT2A6NDA9 AC016396.2-201ENST00000562575 1417 ntBASIC16.65■□□□□ 0.26
LRIT2A6NDA9 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRIT2A6NDA9 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.65■□□□□ 0.26
LRIT2A6NDA9 AC003669.1-201ENST00000334569 611 ntBASIC16.65■□□□□ 0.26
LRIT2A6NDA9 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRIT2A6NDA9 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.65■□□□□ 0.26
LRIT2A6NDA9 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.65■□□□□ 0.26
LRIT2A6NDA9 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.65■□□□□ 0.26
LRIT2A6NDA9 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.65■□□□□ 0.26
LRIT2A6NDA9 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.65■□□□□ 0.26
LRIT2A6NDA9 STK19B-204ENST00000512515 211 ntBASIC16.65■□□□□ 0.26
LRIT2A6NDA9 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.65■□□□□ 0.26
LRIT2A6NDA9 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LRIT2A6NDA9 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.65■□□□□ 0.26
LRIT2A6NDA9 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
LRIT2A6NDA9 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.65■□□□□ 0.26
LRIT2A6NDA9 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRIT2A6NDA9 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRIT2A6NDA9 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.65■□□□□ 0.26
LRIT2A6NDA9 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LRIT2A6NDA9 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.65■□□□□ 0.26
LRIT2A6NDA9 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRIT2A6NDA9 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRIT2A6NDA9 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
LRIT2A6NDA9 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LRIT2A6NDA9 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.65■□□□□ 0.26
LRIT2A6NDA9 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRIT2A6NDA9 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
LRIT2A6NDA9 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.64■□□□□ 0.26
LRIT2A6NDA9 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRIT2A6NDA9 AP005117.1-201ENST00000584346 1413 ntBASIC16.64■□□□□ 0.25
LRIT2A6NDA9 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRIT2A6NDA9 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
LRIT2A6NDA9 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRIT2A6NDA9 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRIT2A6NDA9 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.64■□□□□ 0.25
LRIT2A6NDA9 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRIT2A6NDA9 KLF4P1-201ENST00000412782 1185 ntBASIC16.64■□□□□ 0.25
LRIT2A6NDA9 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.64■□□□□ 0.25
LRIT2A6NDA9 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.64■□□□□ 0.25
LRIT2A6NDA9 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.64■□□□□ 0.25
LRIT2A6NDA9 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.64■□□□□ 0.25
LRIT2A6NDA9 AC106795.1-205ENST00000512851 1056 ntBASIC16.64■□□□□ 0.25
LRIT2A6NDA9 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.64■□□□□ 0.25
LRIT2A6NDA9 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.64■□□□□ 0.25
LRIT2A6NDA9 AP001269.4-201ENST00000609611 512 ntBASIC16.64■□□□□ 0.25
LRIT2A6NDA9 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LRIT2A6NDA9 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LRIT2A6NDA9 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.64■□□□□ 0.25
LRIT2A6NDA9 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LRIT2A6NDA9 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LRIT2A6NDA9 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.64■□□□□ 0.25
LRIT2A6NDA9 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
LRIT2A6NDA9 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRIT2A6NDA9 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRIT2A6NDA9 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
LRIT2A6NDA9 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
LRIT2A6NDA9 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRIT2A6NDA9 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRIT2A6NDA9 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRIT2A6NDA9 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRIT2A6NDA9 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.63■□□□□ 0.25
LRIT2A6NDA9 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRIT2A6NDA9 AL023806.1-201ENST00000603994 1649 ntBASIC16.63■□□□□ 0.25
LRIT2A6NDA9 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRIT2A6NDA9 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms