Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.29■□□□□ 0.04
SHISA3A0PJX4 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SHISA3A0PJX4 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SHISA3A0PJX4 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SHISA3A0PJX4 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
SHISA3A0PJX4 AC022188.1-201ENST00000620960 1664 ntBASIC15.29■□□□□ 0.04
SHISA3A0PJX4 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
SHISA3A0PJX4 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SHISA3A0PJX4 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SHISA3A0PJX4 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SHISA3A0PJX4 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SHISA3A0PJX4 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
SHISA3A0PJX4 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC15.29■□□□□ 0.04
SHISA3A0PJX4 HIST1H2APS4-201ENST00000362070 348 ntBASIC15.29■□□□□ 0.04
SHISA3A0PJX4 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC15.29■□□□□ 0.04
SHISA3A0PJX4 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SHISA3A0PJX4 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SHISA3A0PJX4 PHB2-202ENST00000440277 996 ntTSL 5 BASIC15.29■□□□□ 0.04
SHISA3A0PJX4 MIR4651-201ENST00000582622 73 ntBASIC15.29■□□□□ 0.04
SHISA3A0PJX4 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SHISA3A0PJX4 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SHISA3A0PJX4 AL359736.2-201ENST00000621992 437 ntBASIC15.29■□□□□ 0.04
SHISA3A0PJX4 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC15.29■□□□□ 0.04
SHISA3A0PJX4 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SHISA3A0PJX4 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SHISA3A0PJX4 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SHISA3A0PJX4 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC15.29■□□□□ 0.04
SHISA3A0PJX4 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SHISA3A0PJX4 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
SHISA3A0PJX4 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
SHISA3A0PJX4 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC15.29■□□□□ 0.04
SHISA3A0PJX4 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SHISA3A0PJX4 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SHISA3A0PJX4 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.28■□□□□ 0.04
SHISA3A0PJX4 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SHISA3A0PJX4 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC15.28■□□□□ 0.04
SHISA3A0PJX4 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.28■□□□□ 0.04
SHISA3A0PJX4 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SHISA3A0PJX4 KRT8P9-201ENST00000558927 1449 ntBASIC15.28■□□□□ 0.04
SHISA3A0PJX4 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.28■□□□□ 0.04
SHISA3A0PJX4 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SHISA3A0PJX4 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SHISA3A0PJX4 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.28■□□□□ 0.04
SHISA3A0PJX4 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
SHISA3A0PJX4 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SHISA3A0PJX4 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
SHISA3A0PJX4 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.28■□□□□ 0.04
SHISA3A0PJX4 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SHISA3A0PJX4 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
SHISA3A0PJX4 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC15.28■□□□□ 0.04
SHISA3A0PJX4 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC15.28■□□□□ 0.04
SHISA3A0PJX4 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC15.28■□□□□ 0.04
SHISA3A0PJX4 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
SHISA3A0PJX4 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC15.28■□□□□ 0.04
SHISA3A0PJX4 MIR3917-201ENST00000580971 93 ntBASIC15.28■□□□□ 0.04
SHISA3A0PJX4 GRAMD4P8-201ENST00000605465 1115 ntBASIC15.28■□□□□ 0.04
SHISA3A0PJX4 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC15.28■□□□□ 0.04
SHISA3A0PJX4 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
SHISA3A0PJX4 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SHISA3A0PJX4 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SHISA3A0PJX4 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SHISA3A0PJX4 AC024909.3-201ENST00000611513 2257 ntBASIC15.28■□□□□ 0.04
SHISA3A0PJX4 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
SHISA3A0PJX4 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
SHISA3A0PJX4 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.28■□□□□ 0.04
SHISA3A0PJX4 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SHISA3A0PJX4 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.28■□□□□ 0.04
SHISA3A0PJX4 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SHISA3A0PJX4 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC15.27■□□□□ 0.04
SHISA3A0PJX4 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
SHISA3A0PJX4 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SHISA3A0PJX4 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SHISA3A0PJX4 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC15.27■□□□□ 0.04
SHISA3A0PJX4 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SHISA3A0PJX4 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SHISA3A0PJX4 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SHISA3A0PJX4 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SHISA3A0PJX4 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.27■□□□□ 0.04
SHISA3A0PJX4 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SHISA3A0PJX4 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.27■□□□□ 0.04
SHISA3A0PJX4 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SHISA3A0PJX4 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.27■□□□□ 0.04
SHISA3A0PJX4 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SHISA3A0PJX4 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC15.27■□□□□ 0.04
SHISA3A0PJX4 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
SHISA3A0PJX4 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SHISA3A0PJX4 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.27■□□□□ 0.04
SHISA3A0PJX4 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
SHISA3A0PJX4 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SHISA3A0PJX4 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SHISA3A0PJX4 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC15.27■□□□□ 0.04
SHISA3A0PJX4 PVRIG2P-201ENST00000435460 978 ntBASIC15.27■□□□□ 0.04
SHISA3A0PJX4 AC007663.1-201ENST00000438948 1240 ntBASIC15.27■□□□□ 0.04
SHISA3A0PJX4 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC15.27■□□□□ 0.04
SHISA3A0PJX4 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC15.27■□□□□ 0.04
SHISA3A0PJX4 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC15.27■□□□□ 0.04
SHISA3A0PJX4 TK1-204ENST00000590430 683 ntTSL 3 BASIC15.27■□□□□ 0.04
SHISA3A0PJX4 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SHISA3A0PJX4 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC15.27■□□□□ 0.04
SHISA3A0PJX4 AC105917.1-201ENST00000506637 2539 ntBASIC15.27■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms